› 5i41

X-ray diffraction
1.8Å resolution

Structure of the apo RacA DNA binding domain

Released:
DOI: 10.2210/pdb5i41/pdb
PDB entry 5i41 coloured by chain, front view.
PDB entry 5i41 coloured by chain, side view.
PDB entry 5i41 coloured by chain, top view.
Source organism: Bacillus subtilis subsp. subtilis str. 168
Primary publication:
Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Schumacher MA, Lee J, Zeng W
Nucleic Acids Res 44 5438-49 (2016)
PMID: 27085804

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-155358 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Chromosome-anchoring protein RacA Chain: B
Molecule details ›
Chain: B
Length: 69 amino acids
Theoretical weight: 7.67 KDa
Source organism: Bacillus subtilis subsp. subtilis str. 168
Expression system: Escherichia coli
UniProt:
  • Canonical: P45870 (Residues: 1-66; Coverage: 36%)
Gene names: BSU37030, racA, ywkC
Sequence domains: MerR HTH family regulatory protein
Structure domains: Multidrug-efflux Transporter Regulator; Chain: A; Domain 2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: P212121
Unit cell:
a: 33.78Å b: 34.536Å c: 42.659Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.183 0.18 0.214
Expression system: Escherichia coli

Quick links

Citations

3 review citations

When is a transcription factor a NAP?
Dorman et al. (2020)
2 more

2 mentions without citation

Conformational States of HIV-1 Reverse Transcriptase for Nucleotide Incorporation vs Pyrophosphorolysis-Binding of Foscarnet.
Das et al. (2016)
1 more