Assemblies
Multimeric state:
hetero 44-mer
Accessible surface area:
619007.26 Å2
Buried surface area:
347241.82 Å2
Dissociation area:
1,288.47
Å2
Dissociation energy (ΔGdiss):
2.02
kcal/mol
Dissociation entropy (TΔSdiss):
14
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-135778
Macromolecules
Chain: A
Length: 246 amino acids
Theoretical weight: 26.59 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 246 amino acids
Theoretical weight: 26.59 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX45 (Residues: 2-247; Coverage: 97%)
Pfam:
InterPro:
- Large ribosomal subunit protein uL2
- Nucleic acid-binding, OB-fold
- Large ribosomal subunit protein uL2, RNA-binding domain
- Large ribosomal subunit protein uL2, domain 2
- Large ribosomal subunit protein uL2, C-terminal
- Translation protein SH3-like domain superfamily
- Large ribosomal subunit protein uL2, domain 3
- Large ribosomal subunit protein uL2, conserved site
Chain: B
Length: 387 amino acids
Theoretical weight: 43.85 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L3
InterPro:
Length: 387 amino acids
Theoretical weight: 43.85 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P14126 (Residues: 1-387; Coverage: 100%)
Pfam: Ribosomal protein L3
InterPro:
Chain: E
Length: 176 amino acids
Theoretical weight: 20 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L6e
InterPro:
Length: 176 amino acids
Theoretical weight: 20 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q02326 (Residues: 1-176; Coverage: 100%)
Pfam: Ribosomal protein L6e
InterPro:
Chain: F
Length: 244 amino acids
Theoretical weight: 27.69 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 244 amino acids
Theoretical weight: 27.69 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05737 (Residues: 1-244; Coverage: 100%)
Pfam:
InterPro:
- Large ribosomal subunit protein uL30
- Large ribosomal subunit protein uL30, eukaryotic
- Large ribosomal subunit protein uL30, N-terminal, eukaryotes
- Large ribosomal subunit protein uL30, eukaryotic/archaeal
- Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
- Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
- Large ribosomal subunit protein uL30, conserved site
Chain: G
Length: 256 amino acids
Theoretical weight: 28.18 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
InterPro:
Length: 256 amino acids
Theoretical weight: 28.18 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P17076 (Residues: 1-256; Coverage: 100%)
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
InterPro:
Chain: H
Length: 191 amino acids
Theoretical weight: 21.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L6
InterPro:
Length: 191 amino acids
Theoretical weight: 21.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05738 (Residues: 1-191; Coverage: 100%)
Pfam: Ribosomal protein L6
InterPro:
Chain: L
Length: 199 amino acids
Theoretical weight: 22.6 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L13e
InterPro:
Length: 199 amino acids
Theoretical weight: 22.6 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q12690 (Residues: 1-199; Coverage: 100%)
Pfam: Ribosomal protein L13e
InterPro:
Chain: M
Length: 138 amino acids
Theoretical weight: 15.2 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 138 amino acids
Theoretical weight: 15.2 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P36105 (Residues: 1-138; Coverage: 100%)
Pfam:
InterPro:
Chain: N
Length: 204 amino acids
Theoretical weight: 24.48 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L15
InterPro:
Length: 204 amino acids
Theoretical weight: 24.48 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05748 (Residues: 1-204; Coverage: 100%)
Pfam: Ribosomal L15
InterPro:
Chain: O
Length: 199 amino acids
Theoretical weight: 22.25 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L13
InterPro:
Length: 199 amino acids
Theoretical weight: 22.25 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P26784 (Residues: 1-199; Coverage: 100%)
Pfam: Ribosomal protein L13
InterPro:
Chain: P
Length: 184 amino acids
Theoretical weight: 20.59 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L22p/L17e
InterPro:
Length: 184 amino acids
Theoretical weight: 20.59 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05740 (Residues: 1-184; Coverage: 100%)
Pfam: Ribosomal protein L22p/L17e
InterPro:
Chain: Q
Length: 186 amino acids
Theoretical weight: 20.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein 60S L18 and 50S L18e
InterPro:
Length: 186 amino acids
Theoretical weight: 20.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX49 (Residues: 1-186; Coverage: 100%)
Pfam: Ribosomal protein 60S L18 and 50S L18e
InterPro:
Chain: R
Length: 189 amino acids
Theoretical weight: 21.76 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L19e
InterPro:
Length: 189 amino acids
Theoretical weight: 21.76 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX82 (Residues: 1-189; Coverage: 100%)
Pfam: Ribosomal protein L19e
InterPro:
Chain: S
Length: 172 amino acids
Theoretical weight: 20.48 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
InterPro:
Length: 172 amino acids
Theoretical weight: 20.48 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX23 (Residues: 1-172; Coverage: 100%)
Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
InterPro:
Chain: T
Length: 160 amino acids
Theoretical weight: 18.28 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L21e
InterPro:
Length: 160 amino acids
Theoretical weight: 18.28 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q02753 (Residues: 1-160; Coverage: 100%)
Pfam: Ribosomal protein L21e
InterPro:
Chain: U
Length: 121 amino acids
Theoretical weight: 13.71 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L22e protein family
InterPro:
Length: 121 amino acids
Theoretical weight: 13.71 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05749 (Residues: 1-121; Coverage: 100%)
Pfam: Ribosomal L22e protein family
InterPro:
Chain: V
Length: 137 amino acids
Theoretical weight: 14.49 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L14p/L23e
InterPro:
Length: 137 amino acids
Theoretical weight: 14.49 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX41 (Residues: 1-137; Coverage: 100%)
Pfam: Ribosomal protein L14p/L23e
InterPro:
Chain: W
Length: 155 amino acids
Theoretical weight: 17.66 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L24e
InterPro:
Length: 155 amino acids
Theoretical weight: 17.66 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P04449 (Residues: 1-155; Coverage: 100%)
Pfam: Ribosomal protein L24e
InterPro:
Chain: X
Length: 142 amino acids
Theoretical weight: 15.79 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 142 amino acids
Theoretical weight: 15.79 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P04456 (Residues: 1-142; Coverage: 100%)
Pfam:
InterPro:
Chain: Z
Length: 136 amino acids
Theoretical weight: 15.57 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L27e protein family
InterPro:
Length: 136 amino acids
Theoretical weight: 15.57 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0C2H6 (Residues: 1-136; Coverage: 100%)
Pfam: Ribosomal L27e protein family
InterPro:
Chain: a
Length: 149 amino acids
Theoretical weight: 16.76 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Length: 149 amino acids
Theoretical weight: 16.76 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P02406 (Residues: 1-149; Coverage: 100%)
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Chain: b
Length: 59 amino acids
Theoretical weight: 6.69 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L29e protein family
InterPro: Large ribosomal subunit protein eL29
Length: 59 amino acids
Theoretical weight: 6.69 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05747 (Residues: 1-59; Coverage: 100%)
Pfam: Ribosomal L29e protein family
InterPro: Large ribosomal subunit protein eL29
Chain: c
Length: 105 amino acids
Theoretical weight: 11.43 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
InterPro:
Length: 105 amino acids
Theoretical weight: 11.43 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P14120 (Residues: 1-105; Coverage: 100%)
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
InterPro:
Chain: d
Length: 113 amino acids
Theoretical weight: 12.98 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L31e
InterPro:
Length: 113 amino acids
Theoretical weight: 12.98 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0C2H8 (Residues: 1-113; Coverage: 100%)
Pfam: Ribosomal protein L31e
InterPro:
Chain: e
Length: 130 amino acids
Theoretical weight: 14.81 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L32
InterPro:
Length: 130 amino acids
Theoretical weight: 14.81 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P38061 (Residues: 1-130; Coverage: 100%)
Pfam: Ribosomal protein L32
InterPro:
Chain: f
Length: 107 amino acids
Theoretical weight: 12.18 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L35Ae
InterPro:
Length: 107 amino acids
Theoretical weight: 12.18 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05744 (Residues: 1-107; Coverage: 100%)
Pfam: Ribosomal protein L35Ae
InterPro:
Chain: g
Length: 121 amino acids
Theoretical weight: 13.67 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L34e
InterPro:
Length: 121 amino acids
Theoretical weight: 13.67 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P87262 (Residues: 1-121; Coverage: 100%)
Pfam: Ribosomal protein L34e
InterPro:
Chain: h
Length: 120 amino acids
Theoretical weight: 13.94 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L29 protein
InterPro:
Length: 120 amino acids
Theoretical weight: 13.94 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX84 (Residues: 1-120; Coverage: 100%)
Pfam: Ribosomal L29 protein
InterPro:
Chain: i
Length: 100 amino acids
Theoretical weight: 11.15 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L36e
InterPro:
Length: 100 amino acids
Theoretical weight: 11.15 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P05745 (Residues: 1-100; Coverage: 100%)
Pfam: Ribosomal protein L36e
InterPro:
Chain: j
Length: 88 amino acids
Theoretical weight: 9.88 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L37e
InterPro:
Length: 88 amino acids
Theoretical weight: 9.88 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P49166 (Residues: 1-88; Coverage: 100%)
Pfam: Ribosomal protein L37e
InterPro:
Chain: k
Length: 78 amino acids
Theoretical weight: 8.85 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L38e protein family
InterPro:
Length: 78 amino acids
Theoretical weight: 8.85 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P49167 (Residues: 1-78; Coverage: 100%)
Pfam: Ribosomal L38e protein family
InterPro:
Chain: l
Length: 51 amino acids
Theoretical weight: 6.36 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L39 protein
InterPro:
Length: 51 amino acids
Theoretical weight: 6.36 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P04650 (Residues: 1-51; Coverage: 100%)
Pfam: Ribosomal L39 protein
InterPro:
Chain: o
Length: 106 amino acids
Theoretical weight: 12.25 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal protein L44
InterPro:
Length: 106 amino acids
Theoretical weight: 12.25 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX27 (Residues: 1-106; Coverage: 100%)
Pfam: Ribosomal protein L44
InterPro:
Chain: p
Length: 92 amino acids
Theoretical weight: 10.11 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Ribosomal L37ae protein family
InterPro:
Length: 92 amino acids
Theoretical weight: 10.11 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P0CX25 (Residues: 1-92; Coverage: 100%)
Pfam: Ribosomal L37ae protein family
InterPro:
Chain: w
Length: 248 amino acids
Theoretical weight: 27.81 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 248 amino acids
Theoretical weight: 27.81 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P38861 (Residues: 155-402; Coverage: 48%)
Pfam:
InterPro:
Chain: y
Length: 227 amino acids
Theoretical weight: 24.47 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: eIF-6 family
InterPro: Translation initiation factor IF6
Length: 227 amino acids
Theoretical weight: 24.47 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q12522 (Residues: 1-227; Coverage: 93%)
Pfam: eIF-6 family
InterPro: Translation initiation factor IF6
Chain: z
Length: 56 amino acids
Theoretical weight: 6.74 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Length: 56 amino acids
Theoretical weight: 6.74 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q06709 (Residues: 377-432; Coverage: 13%)
Name:
25S ribosomal RNA
Representative chains: 1
Length: 3396 nucleotides
Theoretical weight: 1097.49 KDa
Rfam: Eukaryotic large subunit ribosomal RNA
Representative chains: 1
Length: 3396 nucleotides
Theoretical weight: 1097.49 KDa
Rfam: Eukaryotic large subunit ribosomal RNA
Name:
5S ribosomal RNA
Representative chains: 3
Length: 121 nucleotides
Theoretical weight: 38.95 KDa
Rfam: 5S ribosomal RNA
Representative chains: 3
Length: 121 nucleotides
Theoretical weight: 38.95 KDa
Rfam: 5S ribosomal RNA
Name:
5.8S ribosomal RNA
Representative chains: 4
Length: 158 nucleotides
Theoretical weight: 50.68 KDa
Rfam: 5.8S ribosomal RNA
Representative chains: 4
Length: 158 nucleotides
Theoretical weight: 50.68 KDa
Rfam: 5.8S ribosomal RNA