› › Function and Biology

Structure of the human RBBP4:MTA1(464-546) complex

Source organism: Homo sapiens
Biochemical function: histone deacetylase binding
Biological process: regulation of stem cell differentiation
Cellular component: ATPase complex

Quick links

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Histone-binding protein RBBP4
The deposited structure of PDB entry 5fxy contains 20 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Histone-binding protein RBBP4. Showing 5 copies in chain A.

PF17226
Domain description: MTA R1 domain
Occurring in:
  1. Metastasis-associated protein MTA1
The deposited structure of PDB entry 5fxy contains 4 copies of Pfam domain PF17226 (MTA R1 domain) in Metastasis-associated protein MTA1. Showing 1 copy in chain B.

PF12265
Domain description: Histone-binding protein RBBP4 or subunit C of CAF1 complex
Occurring in:
  1. Histone-binding protein RBBP4
The deposited structure of PDB entry 5fxy contains 4 copies of Pfam domain PF12265 (Histone-binding protein RBBP4 or subunit C of CAF1 complex) in Histone-binding protein RBBP4. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR001680
Domain description: WD40 repeat
Occurring in:
  1. Histone-binding protein RBBP4
IPR020472
Domain description: G-protein beta WD-40 repeat
Occurring in:
  1. Histone-binding protein RBBP4
IPR019775
Domain description: WD40 repeat, conserved site
Occurring in:
  1. Histone-binding protein RBBP4
IPR040138
Domain description: Mesoderm induction early response protein/metastasis-associated protein
Occurring in:
  1. Metastasis-associated protein MTA1
IPR035170
Domain description: Metastasis-associated protein MTA1, R1 domain
Occurring in:
  1. Metastasis-associated protein MTA1
IPR036322
Domain description: WD40-repeat-containing domain superfamily
Occurring in:
  1. Histone-binding protein RBBP4
IPR022052
Domain description: Histone-binding protein RBBP4, N-terminal
Occurring in:
  1. Histone-binding protein RBBP4
IPR015943
Domain description: WD40/YVTN repeat-like-containing domain superfamily
Occurring in:
  1. Histone-binding protein RBBP4

Structure domain

CATH CATH domain
2.130.10.10
Class: Mainly Beta
Architecture: 7 Propeller
Topology: Methylamine Dehydrogenase; Chain H
Homology: YVTN repeat-like/Quinoprotein amine dehydrogenase
Occurring in:
  1. Histone-binding protein RBBP4
The deposited structure of PDB entry 5fxy contains 4 copies of CATH domain 2.130.10.10 (Methylamine Dehydrogenase; Chain H) in Histone-binding protein RBBP4. Showing 1 copy in chain A.

Quick links