5che

X-ray diffraction
3.2Å resolution

Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with its regulatory proteins

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-154888 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Glutamyl-tRNA reductase 1, chloroplastic Chains: A, B
Molecule details ›
Chains: A, B
Length: 472 amino acids
Theoretical weight: 52.14 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: P42804 (Residues: 73-543; Coverage: 87%)
Gene names: At1g58290, F19C14.9, HEMA, HEMA1
Sequence domains:
Structure domains:
Glutamyl-tRNA reductase-binding protein, chloroplastic Chains: C, D
Molecule details ›
Chains: C, D
Length: 310 amino acids
Theoretical weight: 34.27 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9LU39 (Residues: 42-317; Coverage: 87%)
Gene names: At3g21200, GLUTRBP, MXL8.5, PGR7
Sequence domains: Domain of unknown function (DUF2470)
Structure domains:
Protein FLUORESCENT IN BLUE LIGHT, chloroplastic Chains: E, F
Molecule details ›
Chains: E, F
Length: 159 amino acids
Theoretical weight: 17.77 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q940U6 (Residues: 195-316; Coverage: 39%)
Gene names: At3g14110, FLU, MAG2.7
Sequence domains: Tetratricopeptide repeat
Structure domains: Tetratricopeptide repeat domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: C2
Unit cell:
a: 216.994Å b: 53.211Å c: 203.763Å
α: 90° β: 108.36° γ: 90°
R-values:
R R work R free
0.226 0.223 0.278
Expression system: Escherichia coli