5br3

X-ray diffraction
2.55Å resolution

Crystal structure of hemagglutinin of A/Taiwan/2/2013 (H6N1) in complex with LSTa

Released:
Source organism: Influenza A virus
Primary publication:
Structural and Functional Studies of Influenza Virus A/H6 Hemagglutinin.
PLoS One 10 e0134576 (2015)
PMID: 26226046

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-102496 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Hemagglutinin Chains: A, C
Molecule details ›
Chains: A, C
Length: 326 amino acids
Theoretical weight: 36.66 KDa
Source organism: Influenza A virus
Expression system: unidentified baculovirus
UniProt:
  • Canonical: A0A0M3KL64 (Residues: 1-326; Coverage: 100%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin ha2 chain Chains: B, D
Molecule details ›
Chains: B, D
Length: 171 amino acids
Theoretical weight: 19.65 KDa
Source organism: Influenza A virus
Expression system: unidentified baculovirus
UniProt:
  • Canonical: A0A0M3KL65 (Residues: 1-171; Coverage: 100%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, GAL, SIA
Carbohydrate polymer : NEW Components: NAG, BMA, MAN, FUC
Carbohydrate polymer : NEW Components: NAG, GAL, SIA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: P3
Unit cell:
a: 114.01Å b: 114.01Å c: 163.2Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.202 0.201 0.228
Expression system: unidentified baculovirus