PDBe 5yt6

X-ray diffraction
1.5Å resolution

Crystal structure of TAX1BP1 UBZ2 in complex with mono-ubiquitin

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ubiquitin Chains: A, C, E, G
Molecule details ›
Chains: A, C, E, G
Length: 78 amino acids
Theoretical weight: 8.72 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: P0CG47 (Residues: 153-228; Coverage: 33%)
Gene name: UBB
Sequence domains: Ubiquitin family
Tax1-binding protein 1 Chains: B, D, F, H
Molecule details ›
Chains: B, D, F, H
Length: 35 amino acids
Theoretical weight: 4.26 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: Q86VP1 (Residues: 754-787; Coverage: 4%)
Gene names: PRO0105, T6BP, TAX1BP1
Sequence domains: Autophagy receptor zinc finger-C2H2 domain

Ligands and Environments


No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P212121
Unit cell:
a: 48.709Å b: 72.938Å c: 119.879Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.193 0.225
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'