PDBe 5m5r

X-ray diffraction
1.76Å resolution

Clathrin heavy chain N-terminal domain bound to beta2 adaptin clathrin box motif


Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Clathrin heavy chain 1 Chain: A
Molecule details ›
Chain: A
Length: 365 amino acids
Theoretical weight: 40.54 KDa
Source organism: Bos taurus
Expression system: Escherichia coli BL21(DE3)
  • Canonical: P49951 (Residues: 1-363; Coverage: 22%)
Gene name: CLTC
Sequence domains:
Structure domains: Clathrin heavy-chain terminal domain
AP-2 complex subunit beta Chains: C, D
Molecule details ›
Chains: C, D
Length: 10 amino acids
Theoretical weight: 1.03 KDa
Source organism: Homo sapiens
Expression system: Not provided
  • Canonical: P63010 (Residues: 629-637; Coverage: 1%)
Gene names: ADTB2, AP2B1, CLAPB1

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: C2221
Unit cell:
a: 108.144Å b: 133.177Å c: 77.917Å
α: 90° β: 90° γ: 90°
R R work R free
0.177 0.176 0.205
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided