› 4grx

X-ray diffraction
2.6Å resolution

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-106571 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aminotransferase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 465 amino acids
Theoretical weight: 51.61 KDa
Source organism: Paracoccus denitrificans PD1222
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: A1B956 (Residues: 2-453; Coverage: 100%)
Gene name: Pden_3984
Sequence domains: Aminotransferase class-III
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand NA 4 x NA
Ligand DAV 2 x DAV
1 modified residue:
Ligand LLP 4 x LLP

Experiments and Validation Details

Entry percentile scores
X-ray source: BESSY BEAMLINE 14.1
Spacegroup: P21
Unit cell:
a: 66.79Å b: 103.63Å c: 145.43Å
α: 90° β: 98.88° γ: 90°
R-values:
R R work R free
0.181 0.178 0.227
Expression system: Escherichia coli BL21

Quick links

Citations

5 review citations

Gut microbiota derived metabolites in cardiovascular health and disease.
Wang et al. (2018)
4 more

3 mentions without citation

Crystal structure of an (R)-selective ω-transaminase from Aspergillus terreus.
Łyskowski et al. (2014)
2 more