PDBe 4dkv

X-ray diffraction
2.18Å resolution

Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-10007


Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
clade A/E 93TH057 HIV-1 gp120 core Chains: A, B
Molecule details ›
Chains: A, B
Length: 353 amino acids
Theoretical weight: 39.16 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
  • Canonical: A0A0M3KKW9 (Residues: 1-80, 83-185, 192-353; Coverage: 98%)
Gene name: HIV-1 Env
Sequence domains: Envelope glycoprotein GP120
Structure domains: HIV Envelope Protein Gp120; Chain G

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-BM
Spacegroup: P21
Unit cell:
a: 64.333Å b: 68.773Å c: 93.848Å
α: 90° β: 91.74° γ: 90°
R R work R free
0.202 0.2 0.235
Expression system: Homo sapiens