PDBe 4gwg

X-ray diffraction
1.39Å resolution

Crystal Structure Analysis of 6-phosphogluconate dehydrogenase apo-form


Function and Biology Details

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Entry contents:
1 distinct polypeptide molecule
6-phosphogluconate dehydrogenase, decarboxylating Chain: A
Molecule details ›
Chain: A
Length: 484 amino acids
Theoretical weight: 53.27 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
  • Canonical: P52209 (Residues: 2-483; Coverage: 100%)
  • Best match: P52209-2 (Residues: 1-470)
Gene names: PGD, PGDH
Sequence domains:
Structure domains: N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P43212
Unit cell:
a: 87.28Å b: 87.28Å c: 130.892Å
α: 90° β: 90° γ: 90°
R R work R free
0.17 0.169 0.186
Expression system: Escherichia coli