3vr3

X-ray diffraction
3.4Å resolution

Crystal structure of AMP-PNP bound A3B3 complex from Enterococcus hirae V-ATPase [bA3B3]

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170667 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
V-type sodium ATPase catalytic subunit A Chains: A, B, C
V-type sodium ATPase subunit B Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 465 amino acids
Theoretical weight: 52.42 KDa
Source organism: Enterococcus hirae
Expression system: Cell free synthesis
UniProt:
  • Canonical: Q08637 (Residues: 1-458; Coverage: 100%)
Gene names: EHR_08265, ntpB
Sequence domains:
Structure domains: Rossmann fold

Ligands and Environments

2 bound ligands:
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P212121
Unit cell:
a: 122.11Å b: 124.13Å c: 245.33Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.198 0.239
Expression system: Cell free synthesis