› 3s6o

X-ray diffraction
1.85Å resolution

Crystal structure of a Polysaccharide deacetylase family protein from Burkholderia pseudomallei

Released:
DOI: 10.2210/pdb3s6o/pdb
PDB entry 3s6o coloured by chain, front view.
PDB entry 3s6o coloured by chain, side view.
PDB entry 3s6o coloured by chain, top view.
Source organism: Burkholderia pseudomallei
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179080 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
NodB homology domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 321 amino acids
Theoretical weight: 37.03 KDa
Source organism: Burkholderia pseudomallei
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q63T51 (Residues: 1-317; Coverage: 100%)
Gene name: BPSL2118
Sequence domains: Polysaccharide deacetylase
Structure domains: Glycoside hydrolase/deacetylase

Ligands and Environments

1 bound ligand:
Ligand EDO 2 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Unit cell:
a: 51.41Å b: 165.66Å c: 165.84Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.22 0.218 0.259
Expression system: Escherichia coli BL21(DE3)

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