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The Plexin A1 intracellular region in complex with Rac1

X-ray diffraction
3.582Å resolution
PDB entry 3ryt coloured by chain, front view.
PDB entry 3ryt coloured by chain, side view.
PDB entry 3ryt coloured by chain, top view.
Source organisms:
Assemblies composition:
hetero dimer (preferred)
monomeric
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Ras-related C3 botulinum toxin substrate 1 and Plexin-A1
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Multimeric state: hetero dimer
Accessible surface area: 32556.89 Å2
Buried surface area: 2113.75 Å2
Dissociation area: 572.44 Å2
Dissociation energy (ΔGdiss): 0.9 kcal/mol
Dissociation entropy (TΔSdiss): 12.49 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-158896
Assembly 2
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Assembly Name: Plexin-A1
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Multimeric state: monomeric
Accessible surface area: 26991.26 Å2
Buried surface area: 0.0 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-159712

Macromolecules

Plexin-A1
Chains: A, B
Length: 626 amino acids
Theoretical weight: 71.88 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: P70206 (Residues: 1269-1894; Coverage: 34%)
Gene names: Kiaa4053, Plxna1
Pfam:
InterPro:
CATH:
Plexin-A1 in PDB entry 3ryt, assembly 1, front view.
Plexin-A1 in PDB entry 3ryt, assembly 1, side view.
Plexin-A1 in PDB entry 3ryt, assembly 1, top view.
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Ras-related C3 botulinum toxin substrate 1
Chain: C
Length: 180 amino acids
Theoretical weight: 19.99 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P63000 (Residues: 1-177; Coverage: 92%)
Gene names: MIG5, RAC1, TC25
Pfam: Ras family
InterPro:
CATH: P-loop containing nucleotide triphosphate hydrolases
Ras-related C3 botulinum toxin substrate 1 in PDB entry 3ryt, assembly 1, front view.
Ras-related C3 botulinum toxin substrate 1 in PDB entry 3ryt, assembly 1, side view.
Ras-related C3 botulinum toxin substrate 1 in PDB entry 3ryt, assembly 1, top view.
Molecule details ›

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