3qp5 Citations

A strategy for antagonizing quorum sensing.

Mol Cell 42 199-209 (2011)
Related entries: 3qp1, 3qp2, 3qp4, 3qp6, 3qp8

Cited: 152 times
EuropePMC logo PMID: 21504831

Abstract

Quorum-sensing bacteria communicate via small molecules called autoinducers to coordinate collective behaviors. Because quorum sensing controls virulence factor expression in many clinically relevant pathogens, membrane-permeable quorum sensing antagonists that prevent population-wide expression of virulence genes offer a potential route to novel antibacterial therapeutics. Here, we report a strategy for inhibiting quorum-sensing receptors of the widespread LuxR family. Structure-function studies with natural and synthetic ligands demonstrate that the dimeric LuxR-type transcription factor CviR from Chromobacterium violaceum is potently antagonized by molecules that bind in place of the native acylated homoserine lactone autoinducer, provided that they stabilize a closed conformation. In such conformations, each of the two DNA-binding domains interacts with the ligand-binding domain of the opposing monomer. Consequently, the DNA-binding helices are held apart by ∼60 Å, twice the ∼30 Å separation required for operator binding. This approach may represent a general strategy for the inhibition of multidomain proteins.

Reviews - 3qp5 mentioned but not cited (3)

  1. Quorum sensing signal-response systems in Gram-negative bacteria. Papenfort K, Bassler BL. Nat Rev Microbiol 14 576-588 (2016)
  2. Chemical probes of quorum sensing: from compound development to biological discovery. Welsh MA, Blackwell HE. FEMS Microbiol Rev 40 774-794 (2016)
  3. Quorum Sensing Inhibitors: Curbing Pathogenic Infections through Inhibition of Bacterial Communication. Singh S, Bhatia S. Iran J Pharm Res 20 486-514 (2021)

Articles - 3qp5 mentioned but not cited (25)

  1. A strategy for antagonizing quorum sensing. Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM. Mol Cell 42 199-209 (2011)
  2. Crystal structure of QscR, a Pseudomonas aeruginosa quorum sensing signal receptor. Lintz MJ, Oinuma K, Wysoczynski CL, Greenberg EP, Churchill ME. Proc Natl Acad Sci U S A 108 15763-15768 (2011)
  3. Comprehensive repertoire of foldable regions within whole genomes. Faure G, Callebaut I. PLoS Comput Biol 9 e1003280 (2013)
  4. Computational and Biological Evaluation of β-Adrenoreceptor Blockers as Promising Bacterial Anti-Virulence Agents. Almalki AJ, Ibrahim TS, Elhady SS, Hegazy WAH, Darwish KM. Pharmaceuticals (Basel) 15 110 (2022)
  5. Virtual Screening and Biomolecular Interactions of CviR-Based Quorum Sensing Inhibitors Against Chromobacterium violaceum. Ravichandran V, Zhong L, Wang H, Yu G, Zhang Y, Li A. Front Cell Infect Microbiol 8 292 (2018)
  6. Terazosin Interferes with Quorum Sensing and Type Three Secretion System and Diminishes the Bacterial Espionage to Mitigate the Salmonella Typhimurium Pathogenesis. Hegazy WAH, Salem IM, Alotaibi HF, Khafagy ES, Ibrahim D. Antibiotics (Basel) 11 465 (2022)
  7. Repurposing α-Adrenoreceptor Blockers as Promising Anti-Virulence Agents in Gram-Negative Bacteria. Almalki AJ, Ibrahim TS, Elhady SS, Darwish KM, Hegazy WAH. Antibiotics (Basel) 11 178 (2022)
  8. Structural insights into a novel interkingdom signaling circuit by cartography of the ligand-binding sites of the homologous quorum sensing LuxR-family. Covaceuszach S, Degrassi G, Venturi V, Lamba D. Int J Mol Sci 14 20578-20596 (2013)
  9. Curcumin liposomes interfere with quorum sensing system of Aeromonas sobria and in silico analysis. Ding T, Li T, Wang Z, Li J. Sci Rep 7 8612 (2017)
  10. Inhibition of Quorum Sensing and Biofilm Formation in Chromobacterium violaceum by Fruit Extracts of Passiflora edulis. Venkatramanan M, Sankar Ganesh P, Senthil R, Akshay J, Veera Ravi A, Langeswaran K, Vadivelu J, Nagarajan S, Rajendran K, Shankar EM. ACS Omega 5 25605-25616 (2020)
  11. Identification of New Potential Inhibitors of Quorum Sensing through a Specialized Multi-Level Computational Approach. Martins FG, Melo A, Sousa SF. Molecules 26 2600 (2021)
  12. Crystal structure of the Vibrio cholerae VqmA-ligand-DNA complex provides insight into ligand-binding mechanisms relevant for drug design. Wu H, Li M, Guo H, Zhou H, Li B, Xu Q, Xu C, Yu F, He J. J Biol Chem 294 2580-2592 (2019)
  13. N-Acetylglucosamine Inhibits LuxR, LasR and CviR Based Quorum Sensing Regulated Gene Expression Levels. Kimyon Ö, Ulutürk ZI, Nizalapur S, Lee M, Kutty SK, Beckmann S, Kumar N, Manefield M. Front Microbiol 7 1313 (2016)
  14. In silico identification of albendazole as a quorum sensing inhibitor and its in vitro verification using CviR and LasB receptors based assay systems. Singh S, Bhatia S. Bioimpacts 8 201-209 (2018)
  15. Exploring Phenolic Compounds as Quorum Sensing Inhibitors in Foodborne Bacteria. Santos CA, Lima EMF, Franco BDGM, Pinto UM. Front Microbiol 12 735931 (2021)
  16. Characterization of the Anti-Biofilm and Anti-Quorum Sensing Activities of the β-Adrenoreceptor Antagonist Atenolol against Gram-Negative Bacterial Pathogens. Cavalu S, Elbaramawi SS, Eissa AG, Radwan MF, S Ibrahim T, Khafagy ES, Lopes BS, Ali MAM, Hegazy WAH, Elfaky MA. Int J Mol Sci 23 13088 (2022)
  17. Coumarin Exhibits Broad-Spectrum Antibiofilm and Antiquorum Sensing Activity against Gram-Negative Bacteria: In Vitro and In Silico Investigation. Qais FA, Khan MS, Ahmad I, Husain FM, Khan RA, Hassan I, Shahzad SA, AlHarbi W. ACS Omega 6 18823-18835 (2021)
  18. Muting Bacterial Communication: Evaluation of Prazosin Anti-Quorum Sensing Activities against Gram-Negative Bacteria Pseudomonas aeruginosa, Proteus mirabilis, and Serratia marcescens. Thabit AK, Eljaaly K, Zawawi A, Ibrahim TS, Eissa AG, Elbaramawi SS, Hegazy WAH, Elfaky MA. Biology (Basel) 11 1349 (2022)
  19. Lactiplantibacillus plantarum-Derived Biosurfactant Attenuates Quorum Sensing-Mediated Virulence and Biofilm Formation in Pseudomonas aeruginosa and Chromobacterium violaceum. Patel M, Siddiqui AJ, Ashraf SA, Surti M, Awadelkareem AM, Snoussi M, Hamadou WS, Bardakci F, Jamal A, Jahan S, Sachidanandan M, Adnan M. Microorganisms 10 1026 (2022)
  20. LuxR Solos from Environmental Fluorescent Pseudomonads. Bez C, Covaceuszach S, Bertani I, Choudhary KS, Venturi V. mSphere 6 e01322-20 (2021)
  21. Crystal structure of the N-terminal domain of VqsR from Pseudomonas aeruginosa at 2.1 Å resolution. He Q, Wang K, Su T, Wang F, Gu L, Xu S. Acta Crystallogr F Struct Biol Commun 73 431-436 (2017)
  22. Diminishing the Pathogenesis of the Food-Borne Pathogen Serratia marcescens by Low Doses of Sodium Citrate. Khayat MT, Elbaramawi SS, Nazeih SI, Safo MK, Khafagy ES, Ali MAM, Abbas HA, Hegazy WAH, Seleem NM. Biology (Basel) 12 504 (2023)
  23. In silico prediction of flavan-3-ol as a bioactive compound of Calophyllum macrophyllum as a potential drug against angiostrongylus eosinophilic meningitis. Hambal M, Frengki F, Sari WE, Vanda H. Vet World 15 1305-1313 (2022)
  24. Protein Model and Function Analysis in Quorum-Sensing Pathway of Vibrio qinghaiensis sp.-Q67. Wang ZJ, Chen F, Xu YQ, Huang P, Liu SS. Biology (Basel) 10 638 (2021)
  25. α-Alkylidene δ-lactones inhibit quorum sensing phenotypes in Chromobacterium strain CV026 showing interaction with the CviR receptor. Favero F, Tolentino TA, Fernandes V, Treptow W, Pereira AL, Lira Machado AH. RSC Adv 13 18045-18057 (2023)


Reviews citing this publication (33)

  1. Bacterial quorum sensing: its role in virulence and possibilities for its control. Rutherford ST, Bassler BL. Cold Spring Harb Perspect Med 2 a012427 (2012)
  2. Exploiting quorum sensing to confuse bacterial pathogens. LaSarre B, Federle MJ. Microbiol Mol Biol Rev 77 73-111 (2013)
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  4. Quorum quenching: role in nature and applied developments. Grandclément C, Tannières M, Moréra S, Dessaux Y, Faure D. FEMS Microbiol Rev 40 86-116 (2016)
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  6. Specificity and complexity in bacterial quorum-sensing systems. Hawver LA, Jung SA, Ng WL. FEMS Microbiol Rev 40 738-752 (2016)
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  9. Quorum sensing: how bacteria can coordinate activity and synchronize their response to external signals? Li Z, Nair SK. Protein Sci 21 1403-1417 (2012)
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  23. Modulation of Quorum Sensing and Biofilms in Less Investigated Gram-Negative ESKAPE Pathogens. Lazar V, Holban AM, Curutiu C, Chifiriuc MC. Front Microbiol 12 676510 (2021)
  24. Quorum sensing intervened bacterial signaling: Pursuit of its cognizance and repression. Vadakkan K, Choudhury AA, Gunasekaran R, Hemapriya J, Vijayanand S. J Genet Eng Biotechnol 16 239-252 (2018)
  25. Biofilm Lifestyle in Recurrent Urinary Tract Infections. Lila ASA, Rajab AAH, Abdallah MH, Rizvi SMD, Moin A, Khafagy ES, Tabrez S, Hegazy WAH. Life (Basel) 13 148 (2023)
  26. Resistance Is Not Futile: The Role of Quorum Sensing Plasticity in Pseudomonas aeruginosa Infections and Its Link to Intrinsic Mechanisms of Antibiotic Resistance. Simanek KA, Paczkowski JE. Microorganisms 10 1247 (2022)
  27. A structural perspective on the mechanisms of quorum sensing activation in bacteria. Lixa C, Mujo A, Anobom CD, Pinheiro AS. An Acad Bras Cienc 87 2189-2203 (2015)
  28. Molecular Mechanisms and Applications of N-Acyl Homoserine Lactone-Mediated Quorum Sensing in Bacteria. Kumar L, Patel SKS, Kharga K, Kumar R, Kumar P, Pandohee J, Kulshresha S, Harjai K, Chhibber S. Molecules 27 7584 (2022)
  29. Cnidarian Interaction with Microbial Communities: From Aid to Animal's Health to Rejection Responses. Stabili L, Parisi MG, Parrinello D, Cammarata M. Mar Drugs 16 E296 (2018)
  30. [Which alternatives are at our disposal in the anti-infectious therapeutics face to multi-drug resistant bacteria?]. Bourlioux P. Ann Pharm Fr 71 150-158 (2013)
  31. Targeted Anti-Biofilm Therapy: Dissecting Targets in the Biofilm Life Cycle. Bu F, Liu M, Xie Z, Chen X, Li G, Wang X. Pharmaceuticals (Basel) 15 1253 (2022)
  32. Achieving Partial Nitritation by Treating Sludge With Free Nitrous Acid: The Potential Role of Quorum Sensing. Jiang C, Wang X, Wang H, Xu S, Zhang W, Meng Q, Zhuang X. Front Microbiol 13 897566 (2022)
  33. Quorum sensing interference by phenolic compounds - A matter of bacterial misunderstanding. Lima EMF, Winans SC, Pinto UM. Heliyon 9 e17657 (2023)

Articles citing this publication (91)

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  3. The RhlR quorum-sensing receptor controls Pseudomonas aeruginosa pathogenesis and biofilm development independently of its canonical homoserine lactone autoinducer. Mukherjee S, Moustafa D, Smith CD, Goldberg JB, Bassler BL. PLoS Pathog 13 e1006504 (2017)
  4. Shedding light on bioluminescence regulation in Vibrio fischeri. Miyashiro T, Ruby EG. Mol Microbiol 84 795-806 (2012)
  5. Flavonoids Suppress Pseudomonas aeruginosa Virulence through Allosteric Inhibition of Quorum-sensing Receptors. Paczkowski JE, Mukherjee S, McCready AR, Cong JP, Aquino CJ, Kim H, Henke BR, Smith CD, Bassler BL. J Biol Chem 292 4064-4076 (2017)
  6. Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor. Stauff DL, Bassler BL. J Bacteriol 193 3871-3878 (2011)
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  13. Thiolactone modulators of quorum sensing revealed through library design and screening. McInnis CE, Blackwell HE. Bioorg Med Chem 19 4820-4828 (2011)
  14. Topical application of probiotics in skin: adhesion, antimicrobial and antibiofilm in vitro assays. Lopes EG, Moreira DA, Gullón P, Gullón B, Cardelle-Cobas A, Tavaria FK. J Appl Microbiol 122 450-461 (2017)
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  16. Effect of Quercetin Rich Onion Extracts on Bacterial Quorum Sensing. Quecan BXV, Santos JTC, Rivera MLC, Hassimotto NMA, Almeida FA, Pinto UM. Front Microbiol 10 867 (2019)
  17. Potent and Selective Modulation of the RhlR Quorum Sensing Receptor by Using Non-native Ligands: An Emerging Target for Virulence Control in Pseudomonas aeruginosa. Eibergen NR, Moore JD, Mattmann ME, Blackwell HE. Chembiochem 16 2348-2356 (2015)
  18. Structural determinants driving homoserine lactone ligand selection in the Pseudomonas aeruginosa LasR quorum-sensing receptor. McCready AR, Paczkowski JE, Henke BR, Bassler BL. Proc Natl Acad Sci U S A 116 245-254 (2019)
  19. Coral-associated bacteria, quorum sensing disrupters, and the regulation of biofouling. Golberg K, Pavlov V, Marks RS, Kushmaro A. Biofouling 29 669-682 (2013)
  20. Interference of bacterial cell-to-cell communication: a new concept of antimicrobial chemotherapy breaks antibiotic resistance. Hirakawa H, Tomita H. Front Microbiol 4 114 (2013)
  21. Structural insights into the molecular mechanism of Escherichia coli SdiA, a quorum-sensing receptor. Kim T, Duong T, Wu CA, Choi J, Lan N, Kang SW, Lokanath NK, Shin D, Hwang HY, Kim KK. Acta Crystallogr D Biol Crystallogr 70 694-707 (2014)
  22. A diketopiperazine factor from Rheinheimera aquimaris QSI02 exhibits anti-quorum sensing activity. Sun S, Dai X, Sun J, Bu X, Weng C, Li H, Zhu H. Sci Rep 6 39637 (2016)
  23. Mutational analysis of the quorum-sensing receptor LasR reveals interactions that govern activation and inhibition by nonlactone ligands. Gerdt JP, McInnis CE, Schell TL, Rossi FM, Blackwell HE. Chem Biol 21 1361-1369 (2014)
  24. Attenuation of virulence in pathogenic bacteria using synthetic quorum-sensing modulators under native conditions on plant hosts. Palmer AG, Streng E, Blackwell HE. ACS Chem Biol 6 1348-1356 (2011)
  25. Development of potent inhibitors of pyocyanin production in Pseudomonas aeruginosa. Miller LC, O'Loughlin CT, Zhang Z, Siryaporn A, Silpe JE, Bassler BL, Semmelhack MF. J Med Chem 58 1298-1306 (2015)
  26. Large-scale detection of drug off-targets: hypotheses for drug repurposing and understanding side-effects. Chartier M, Morency LP, Zylber MI, Najmanovich RJ. BMC Pharmacol Toxicol 18 18 (2017)
  27. Acinetobacter baumannii quorum-sensing signalling molecule induces the expression of drug-resistance genes. Dou Y, Song F, Guo F, Zhou Z, Zhu C, Xiang J, Huan J. Mol Med Rep 15 4061-4068 (2017)
  28. Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. O'Reilly MC, Dong SH, Rossi FM, Karlen KM, Kumar RS, Nair SK, Blackwell HE. Cell Chem Biol 25 1128-1139.e3 (2018)
  29. Simplified AIP-II Peptidomimetics Are Potent Inhibitors of Staphylococcus aureus AgrC Quorum Sensing Receptors. Vasquez JK, Tal-Gan Y, Cornilescu G, Tyler KA, Blackwell HE. Chembiochem 18 413-423 (2017)
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  32. Directed evolution of the quorum-sensing regulator EsaR for increased signal sensitivity. Shong J, Huang YM, Bystroff C, Collins CH. ACS Chem Biol 8 789-795 (2013)
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