› 3q34

X-ray diffraction
1.7Å resolution

The crystal structure of YceI-like family protein from Pseudomonas syringae

Released:
DOI: 10.2210/pdb3q34/pdb
PDB entry 3q34 coloured by chain, front view.
PDB entry 3q34 coloured by chain, side view.
PDB entry 3q34 coloured by chain, top view.
Source organism: Pseudomonas savastanoi pv. phaseolicola 1448A
Entry authors: Zhang Z, Burley SK, Swaminathan S, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175378 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipid/polyisoprenoid-binding YceI-like domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 184 amino acids
Theoretical weight: 20.75 KDa
Source organism: Pseudomonas savastanoi pv. phaseolicola 1448A
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q48EL2 (Residues: 21-193; Coverage: 100%)
Gene name: PSPPH_4050
Sequence domains: YceI-like domain
Structure domains: Lipid/polyisoprenoid-binding, YceI-like

Ligands and Environments

2 bound ligands:
Ligand UQ8 4 x UQ8
Ligand GOL 3 x GOL
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X25
Spacegroup: P21
Unit cell:
a: 54.647Å b: 103.357Å c: 63.193Å
α: 90° β: 109.04° γ: 90°
R-values:
R R work R free
0.172 0.17 0.207
Expression system: Escherichia coli BL21(DE3)

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