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Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide

Source organism: Human adenovirus D37
Biochemical function: not assigned
Biological process: virion attachment to host cell
Cellular component: viral capsid

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GO terms

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Sequence family

Pfam Protein family (Pfam)
PF00541
Domain description: Adenoviral fibre protein (knob domain)
Occurring in:
  1. Adenoviral fibre protein knob domain-containing protein
The deposited structure of PDB entry 3n0i contains 3 copies of Pfam domain PF00541 (Adenoviral fibre protein (knob domain)) in Adenoviral fibre protein knob domain-containing protein. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR000931
Domain description: Adenovirus fibre protein
Occurring in:
  1. Adenoviral fibre protein knob domain-containing protein
IPR008982
Domain description: Adenovirus pIV-like, attachment domain
Occurring in:
  1. Adenoviral fibre protein knob domain-containing protein
IPR000978
Domain description: Adenoviral fibre protein, knob
Occurring in:
  1. Adenoviral fibre protein knob domain-containing protein

Structure domain

CATH CATH domain
2.60.90.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homology: Adenovirus pIV-related, attachment domain
Occurring in:
  1. Adenoviral fibre protein knob domain-containing protein
The deposited structure of PDB entry 3n0i contains 3 copies of CATH domain 2.60.90.10 (Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)) in Adenoviral fibre protein knob domain-containing protein. Showing 1 copy in chain B.

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