› 3k7c

X-ray diffraction
2Å resolution

Crystal structure of Putative NTF2-like transpeptidase (NP_281412.1) from CAMPYLOBACTER JEJUNI at 2.00 A resolution

Released:
DOI: 10.2210/pdb3k7c/pdb
PDB entry 3k7c coloured by chain, front view.
PDB entry 3k7c coloured by chain, side view.
PDB entry 3k7c coloured by chain, top view.
Source organism: Campylobacter jejuni
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171062 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4878 domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 114 amino acids
Theoretical weight: 12.9 KDa
Source organism: Campylobacter jejuni
Expression system: Escherichia coli
UniProt:
  • Canonical: Q0PBT7 (Residues: 1-113; Coverage: 100%)
Gene name: Cj0202c
Sequence domains: Domain of unknown function (DUF4878)
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

3 bound ligands:
Ligand CL 1 x CL
Ligand PEG 13 x PEG
Ligand PGE 6 x PGE
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2
Unit cell:
a: 94.442Å b: 89.807Å c: 59.665Å
α: 90° β: 110.5° γ: 90°
R-values:
R R work R free
0.216 0.214 0.256
Expression system: Escherichia coli

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