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Complex structure of EED and trimethylated H3K9

X-ray diffraction
1.76Å resolution
PDB entry 3k27 coloured by chain, front view.
PDB entry 3k27 coloured by chain, side view.
PDB entry 3k27 coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
hetero dimer (preferred)
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Polycomb protein EED and peptide
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Multimeric state: hetero dimer
Accessible surface area: 15769.14 Å2
Buried surface area: 817.59 Å2
Dissociation area: 408.79 Å2
Dissociation energy (ΔGdiss): -0.93 kcal/mol
Dissociation entropy (TΔSdiss): 6.49 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-131020

Macromolecules

Polycomb protein EED
Chain: A
Length: 366 amino acids
Theoretical weight: 42.3 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O75530 (Residues: 76-441; Coverage: 83%)
Gene name: EED
Pfam: WD domain, G-beta repeat
InterPro:
CATH: YVTN repeat-like/Quinoprotein amine dehydrogenase
Polycomb protein EED in PDB entry 3k27, assembly 1, front view.
Polycomb protein EED in PDB entry 3k27, assembly 1, side view.
Polycomb protein EED in PDB entry 3k27, assembly 1, top view.
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HISTONE PEPTIDE
Chain: B
Length: 9 amino acids
Theoretical weight: 1.02 KDa
Source organism: Homo sapiens
Expression system: Not provided
HISTONE PEPTIDE in PDB entry 3k27, assembly 1, front view.
HISTONE PEPTIDE in PDB entry 3k27, assembly 1, side view.
HISTONE PEPTIDE in PDB entry 3k27, assembly 1, top view.
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