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Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit

Source organism: Plasmodium falciparum 3D7
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribosome

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
The deposited structure of PDB entry 3j79 contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6 alpha-beta domain-containing protein. Showing 2 copies in chain H.

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
  2. 60S ribosomal protein L7a
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in 60S ribosomal protein L7a. Showing 1 copy in chain J.
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein. Showing 1 copy in chain GA [auth 6].

PF00935
Domain description: Ribosomal protein L44
Occurring in:
  1. Large ribosomal subunit protein eL42
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00935 (Ribosomal protein L44) in Large ribosomal subunit protein eL42. Showing 1 copy in chain SA [auth i].

PF01780
Domain description: Ribosomal L37ae protein family
Occurring in:
  1. Large ribosomal subunit protein eL43
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01780 (Ribosomal L37ae protein family) in Large ribosomal subunit protein eL43. Showing 1 copy in chain RA [auth h].

PF05162
Domain description: Ribosomal protein L41
Occurring in:
  1. 60S ribosomal protein L41
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF05162 (Ribosomal protein L41) in 60S ribosomal protein L41. Showing 1 copy in chain QA [auth g].

PF01020
Domain description: Ribosomal L40e family
Occurring in:
  1. Ubiquitin-like domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01020 (Ribosomal L40e family) in Ubiquitin-like domain-containing protein. Showing 1 copy in chain PA [auth f].

PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin-like domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin-like domain-containing protein. Showing 1 copy in chain PA [auth f] (this domain is out of the observed residue ranges!).

PF00832
Domain description: Ribosomal L39 protein
Occurring in:
  1. 60S ribosomal protein L39
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00832 (Ribosomal L39 protein) in 60S ribosomal protein L39. Showing 1 copy in chain OA [auth e].

PF01781
Domain description: Ribosomal L38e protein family
Occurring in:
  1. 60S ribosomal protein L38
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01781 (Ribosomal L38e protein family) in 60S ribosomal protein L38. Showing 1 copy in chain NA [auth d].

PF01907
Domain description: Ribosomal protein L37e
Occurring in:
  1. Ribosomal protein L37
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01907 (Ribosomal protein L37e) in Ribosomal protein L37. Showing 1 copy in chain MA [auth c].

PF01158
Domain description: Ribosomal protein L36e
Occurring in:
  1. 60S ribosomal protein L36
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01158 (Ribosomal protein L36e) in 60S ribosomal protein L36. Showing 1 copy in chain LA [auth b].

PF01199
Domain description: Ribosomal protein L34e
Occurring in:
  1. 60S ribosomal protein L34
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01199 (Ribosomal protein L34e) in 60S ribosomal protein L34. Showing 1 copy in chain KA [auth a].

PF00467
Domain description: KOW motif
Occurring in:
  1. KOW domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00467 (KOW motif) in KOW domain-containing protein. Showing 1 copy in chain Z.

PF16906
Domain description: Ribosomal proteins L26 eukaryotic, L24P archaeal
Occurring in:
  1. KOW domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF16906 (Ribosomal proteins L26 eukaryotic, L24P archaeal) in KOW domain-containing protein. Showing 1 copy in chain Z.

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23 N-terminal domain-containing protein. Showing 1 copy in chain Y.

PF03939
Domain description: Ribosomal protein L23, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF03939 (Ribosomal protein L23, N-terminal domain) in Large ribosomal subunit protein uL23 N-terminal domain-containing protein. Showing 1 copy in chain Y.

PF01776
Domain description: Ribosomal L22e protein family
Occurring in:
  1. Large ribosomal subunit protein eL22
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01776 (Ribosomal L22e protein family) in Large ribosomal subunit protein eL22. Showing 1 copy in chain X.

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. 60S ribosomal protein L17, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in 60S ribosomal protein L17, putative. Showing 1 copy in chain W.

PF01157
Domain description: Ribosomal protein L21e
Occurring in:
  1. 60S ribosomal protein L21
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01157 (Ribosomal protein L21e) in 60S ribosomal protein L21. Showing 1 copy in chain V.

PF01775
Domain description: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Occurring in:
  1. 60S ribosomal protein L18a
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01775 (Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A) in 60S ribosomal protein L18a. Showing 1 copy in chain U.

PF01280
Domain description: Ribosomal protein L19e
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01280 (Ribosomal protein L19e) in Large ribosomal subunit protein eL19 domain-containing protein. Showing 1 copy in chain T.

PF17135
Domain description: Ribosomal protein 60S L18 and 50S L18e
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF17135 (Ribosomal protein 60S L18 and 50S L18e) in Large ribosomal subunit protein uL15/eL18 domain-containing protein. Showing 1 copy in chain S.

PF14204
Domain description: Ribosomal L18 C-terminal region
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF14204 (Ribosomal L18 C-terminal region) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain R.

PF17144
Domain description: Ribosomal large subunit proteins 60S L5, and 50S L18
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF17144 (Ribosomal large subunit proteins 60S L5, and 50S L18) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain R.

PF00252
Domain description: Ribosomal protein L16p/L10e
Occurring in:
  1. 60S ribosomal protein L10, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00252 (Ribosomal protein L16p/L10e) in 60S ribosomal protein L10, putative. Showing 1 copy in chain Q.

PF00827
Domain description: Ribosomal L15
Occurring in:
  1. Ribosomal protein L15
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00827 (Ribosomal L15) in Ribosomal protein L15. Showing 1 copy in chain P.

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15/eL18 domain-containing protein. Showing 1 copy in chain O.

PF01929
Domain description: Ribosomal protein L14
Occurring in:
  1. Large ribosomal subunit protein eL14 domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01929 (Ribosomal protein L14) in Large ribosomal subunit protein eL14 domain-containing protein. Showing 1 copy in chain N.

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. 60S ribosomal protein L23, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in 60S ribosomal protein L23, putative. Showing 1 copy in chain M.

PF01294
Domain description: Ribosomal protein L13e
Occurring in:
  1. 60S ribosomal protein L13
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01294 (Ribosomal protein L13e) in 60S ribosomal protein L13. Showing 1 copy in chain L.

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. 60S ribosomal protein L13, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in 60S ribosomal protein L13, putative. Showing 1 copy in chain K.

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. 60S ribosomal protein L11a, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in 60S ribosomal protein L11a, putative. Showing 1 copy in chain G.

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. 60S ribosomal protein L11a, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in 60S ribosomal protein L11a, putative. Showing 1 copy in chain G.

PF14374
Domain description: 60S ribosomal protein L4 C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF14374 (60S ribosomal protein L4 C-terminal domain) in Large ribosomal subunit protein uL4 C-terminal domain-containing protein. Showing 1 copy in chain F.

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4 C-terminal domain-containing protein. Showing 1 copy in chain F.

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. 60S ribosomal protein L3
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in 60S ribosomal protein L3. Showing 1 copy in chain E.

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2 C-terminal domain-containing protein. Showing 1 copy in chain D.

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2 C-terminal domain-containing protein. Showing 1 copy in chain D.

PF01247
Domain description: Ribosomal protein L35Ae
Occurring in:
  1. 60S ribosomal protein L35ae, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01247 (Ribosomal protein L35Ae) in 60S ribosomal protein L35ae, putative. Showing 1 copy in chain JA [auth 9].

PF01655
Domain description: Ribosomal protein L32
Occurring in:
  1. 60S ribosomal protein L32
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01655 (Ribosomal protein L32) in 60S ribosomal protein L32. Showing 1 copy in chain IA [auth 8].

PF01198
Domain description: Ribosomal protein L31e
Occurring in:
  1. 60S ribosomal protein L31
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01198 (Ribosomal protein L31e) in 60S ribosomal protein L31. Showing 1 copy in chain HA [auth 7].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. 60S ribosomal protein L7, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in 60S ribosomal protein L7, putative. Showing 1 copy in chain FA [auth 5].

PF08079
Domain description: Ribosomal L30 N-terminal domain
Occurring in:
  1. 60S ribosomal protein L7, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF08079 (Ribosomal L30 N-terminal domain) in 60S ribosomal protein L7, putative. Showing 1 copy in chain FA [auth 5].

PF01779
Domain description: Ribosomal L29e protein family
Occurring in:
  1. 60S ribosomal protein L29
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01779 (Ribosomal L29e protein family) in 60S ribosomal protein L29. Showing 1 copy in chain EA [auth 4].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. 60S ribosomal protein L35, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in 60S ribosomal protein L35, putative. Showing 1 copy in chain DA [auth 3].

PF01778
Domain description: Ribosomal L28e protein family
Occurring in:
  1. Ribosomal eL28/Mak16 domain-containing protein
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01778 (Ribosomal L28e protein family) in Ribosomal eL28/Mak16 domain-containing protein. Showing 1 copy in chain CA [auth 2].

PF01777
Domain description: Ribosomal L27e protein family
Occurring in:
  1. 60S ribosomal protein L27
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01777 (Ribosomal L27e protein family) in 60S ribosomal protein L27. Showing 1 copy in chain BA [auth 1].

PF01246
Domain description: Ribosomal protein L24e
Occurring in:
  1. 60S ribosomal protein L24, putative
The deposited structure of PDB entry 3j79 contains 1 copy of Pfam domain PF01246 (Ribosomal protein L24e) in 60S ribosomal protein L24, putative. Showing 1 copy in chain AA [auth 0].

Rfam RNA families (Rfam)
RF02543
Domain description: Eukaryotic large subunit ribosomal RNA
Occurring in:
  1. 28S ribosomal RNA
The deposited structure of PDB entry 3j79 contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in 28S ribosomal RNA. Showing 1 copy in chain A.

RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. 5S ribosomal RNA
The deposited structure of PDB entry 3j79 contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in 5S ribosomal RNA. Showing 1 copy in chain B.

RF00002
Domain description: 5.8S ribosomal RNA
Occurring in:
  1. 5.8S ribosomal RNA
The deposited structure of PDB entry 3j79 contains 1 copy of Rfam domain RF00002 (5.8S ribosomal RNA) in 5.8S ribosomal RNA. Showing 1 copy in chain C.

InterPro InterPro annotations
IPR005485
Domain description: Large ribosomal subunit protein uL18 eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
IPR001921
Domain description: Large ribosomal subunit protein eL8
Occurring in:
  1. 60S ribosomal protein L7a
IPR008195
Domain description: Large ribosomal subunit protein eL34
Occurring in:
  1. 60S ribosomal protein L34
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. 60S ribosomal protein L27
  2. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
  3. 60S ribosomal protein eL6
  4. Large ribosomal subunit protein eL14 domain-containing protein
  5. 60S ribosomal protein L21
  6. KOW domain-containing protein
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Ribosomal protein L37
  2. Ubiquitin-like domain-containing protein
  3. Large ribosomal subunit protein eL43
  4. Large ribosomal subunit protein eL42
IPR005756
Domain description: Large ribosomal subunit protein uL24, eukaryotic/archaeal
Occurring in:
  1. KOW domain-containing protein
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. 60S ribosomal protein L13, putative
IPR018492
Domain description: Ribosomal protein eL8/Nhp2 family
Occurring in:
  1. 60S ribosomal protein L7a
IPR036789
Domain description: Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
  2. 60S ribosomal protein eL6
  3. Large ribosomal subunit protein eL14 domain-containing protein
  4. KOW domain-containing protein
IPR000054
Domain description: Large ribosomal subunit protein eL31
Occurring in:
  1. 60S ribosomal protein L31
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
  2. 60S ribosomal protein L7a
IPR000552
Domain description: Large ribosomal subunit protein eL42
Occurring in:
  1. Large ribosomal subunit protein eL42
IPR002674
Domain description: Large ribosomal subunit protein eL43
Occurring in:
  1. Large ribosomal subunit protein eL43
IPR019956
Domain description: Ubiquitin domain
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR000509
Domain description: Large ribosomal subunit protein eL36
Occurring in:
  1. 60S ribosomal protein L36
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
IPR000196
Domain description: Large ribosomal subunit protein eL19 domain
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
IPR001197
Domain description: Large ribosomal subunit protein uL16, eukaryotes/archaea
Occurring in:
  1. 60S ribosomal protein L10, putative
IPR000439
Domain description: Large ribosomal subunit protein eL15
Occurring in:
  1. Ribosomal protein L15
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. 60S ribosomal protein L23, putative
IPR001380
Domain description: Large ribosomal subunit protein eL13
Occurring in:
  1. 60S ribosomal protein L13
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR001780
Domain description: Large ribosomal subunit protein eL33
Occurring in:
  1. 60S ribosomal protein L35ae, putative
IPR001515
Domain description: Large ribosomal subunit protein eL32
Occurring in:
  1. 60S ribosomal protein L32
IPR000988
Domain description: Large ribosomal subunit protein eL24-related
Occurring in:
  1. 60S ribosomal protein L24, putative
IPR001975
Domain description: Large ribosomal subunit protein eL40 domain
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR023626
Domain description: Large ribosomal subunit protein eL39 domain superfamily
Occurring in:
  1. 60S ribosomal protein L39
IPR002675
Domain description: Large ribosomal subunit protein eL38
Occurring in:
  1. 60S ribosomal protein L38
IPR001569
Domain description: Large ribosomal subunit protein eL37
Occurring in:
  1. Ribosomal protein L37
IPR011331
Domain description: Large ribosomal subunit protein eL37/eL43
Occurring in:
  1. Ribosomal protein L37
  2. Large ribosomal subunit protein eL43
IPR005824
Domain description: KOW
Occurring in:
  1. KOW domain-containing protein
IPR002671
Domain description: Large ribosomal subunit protein eL22
Occurring in:
  1. Large ribosomal subunit protein eL22
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. 60S ribosomal protein L17, putative
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. 60S ribosomal protein L17, putative
IPR005721
Domain description: Large ribosomal subunit protein uL22, eukaryotic/archaeal
Occurring in:
  1. 60S ribosomal protein L17, putative
IPR001147
Domain description: Large ribosomal subunit protein eL21
Occurring in:
  1. 60S ribosomal protein L21
IPR021138
Domain description: Large ribosomal subunit protein eL20, eukaryotes
Occurring in:
  1. 60S ribosomal protein L18a
IPR036920
Domain description: Large ribosomal subunit protein uL16 superfamily
Occurring in:
  1. 60S ribosomal protein L10, putative
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Ribosomal protein L15
  2. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
  2. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
  2. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. 60S ribosomal protein L23, putative
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. 60S ribosomal protein L13, putative
IPR000915
Domain description: Large ribosomal subunit protein eL6
Occurring in:
  1. 60S ribosomal protein eL6
IPR020040
Domain description: Large ribosomal subunit protein uL6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
IPR000702
Domain description: Large ribosomal subunit protein uL6-like
Occurring in:
  1. Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
IPR022803
Domain description: Large ribosomal subunit protein uL5 domain superfamily
Occurring in:
  1. 60S ribosomal protein L11a, putative
IPR002132
Domain description: Large ribosomal subunit protein uL5
Occurring in:
  1. 60S ribosomal protein L11a, putative
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. 60S ribosomal protein L35ae, putative
  2. 60S ribosomal protein L3
IPR023621
Domain description: Large ribosomal subunit protein eL31 domain superfamily
Occurring in:
  1. 60S ribosomal protein L31
IPR022991
Domain description: Large ribosomal subunit protein eL30, conserved site
Occurring in:
  1. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
  2. 60S ribosomal protein L7a
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR002673
Domain description: Large ribosomal subunit protein eL29
Occurring in:
  1. 60S ribosomal protein L29
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. 60S ribosomal protein L35, putative
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. 60S ribosomal protein L35, putative
IPR001141
Domain description: Large ribosomal subunit protein eL27
Occurring in:
  1. 60S ribosomal protein L27
IPR007836
Domain description: Large ribosomal subunit protein eS32
Occurring in:
  1. 60S ribosomal protein L41
IPR038587
Domain description: Large ribosomal subunit protein eL40 superfamily
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR019954
Domain description: Ubiquitin conserved site
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Ubiquitin-like domain-containing protein
IPR020083
Domain description: Large ribosomal subunit protein eL39, conserved site
Occurring in:
  1. 60S ribosomal protein L39
IPR000077
Domain description: Large ribosomal subunit protein eL39
Occurring in:
  1. 60S ribosomal protein L39
IPR038464
Domain description: Large ribosomal subunit protein eL38 superfamily
Occurring in:
  1. 60S ribosomal protein L38
IPR018267
Domain description: Large ribosomal subunit protein eL37, conserved site
Occurring in:
  1. Ribosomal protein L37
IPR038097
Domain description: Large ribosomal subunit protein eL36 domain superfamily
Occurring in:
  1. 60S ribosomal protein L36
IPR018065
Domain description: Large ribosomal subunit protein eL34, conserved site
Occurring in:
  1. 60S ribosomal protein L34
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. KOW domain-containing protein
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
IPR005633
Domain description: Large ribosomal subunit protein uL23, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL23 N-terminal domain-containing protein
IPR038526
Domain description: Large ribosomal subunit protein eL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL22
IPR018259
Domain description: Large ribosomal subunit protein eL21, conserved site
Occurring in:
  1. 60S ribosomal protein L21
IPR036948
Domain description: Large ribosomal subunit protein eL21 superfamily
Occurring in:
  1. 60S ribosomal protein L21
IPR023573
Domain description: Large ribosomal subunit protein eL20 domain
Occurring in:
  1. 60S ribosomal protein L18a
IPR028877
Domain description: Large ribosomal subunit protein eL20
Occurring in:
  1. 60S ribosomal protein L18a
IPR033935
Domain description: Large ribosomal subunit protein eL19, eukaryotic
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
IPR039547
Domain description: Large ribosomal subunit protein eL19
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
IPR035970
Domain description: Large ribosomal subunit protein eL19 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
IPR015972
Domain description: Large ribosomal subunit protein eL19, domain 1
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
IPR021132
Domain description: Large ribosomal subunit protein eL18, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR000039
Domain description: Large ribosomal subunit protein eL18
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR025607
Domain description: Large ribosomal subunit protein uL18, C-terminal, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
IPR018255
Domain description: Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea
Occurring in:
  1. 60S ribosomal protein L10, putative
IPR016180
Domain description: Large ribosomal subunit protein uL16 domain
Occurring in:
  1. 60S ribosomal protein L10, putative
IPR047873
Domain description: Large ribosomal subunit protein uL16
Occurring in:
  1. 60S ribosomal protein L10, putative
IPR020925
Domain description: Large ribosomal subunit protein eL15, conserved site
Occurring in:
  1. Ribosomal protein L15
IPR024794
Domain description: Large ribosomal subunit protein eL15 core domain superfamily
Occurring in:
  1. Ribosomal protein L15
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
IPR002784
Domain description: Large ribosomal subunit protein eL14 domain
Occurring in:
  1. Large ribosomal subunit protein eL14 domain-containing protein
IPR041985
Domain description: Large ribosomal subunit protein eL14, KOW motif
Occurring in:
  1. Large ribosomal subunit protein eL14 domain-containing protein
IPR039660
Domain description: Large ribosomal subunit protein eL14
Occurring in:
  1. Large ribosomal subunit protein eL14 domain-containing protein
IPR018256
Domain description: Large ribosomal subunit protein eL13, conserved site
Occurring in:
  1. 60S ribosomal protein L13
IPR005755
Domain description: Large ribosomal subunit protein uL13, eukaryotic/archaeal
Occurring in:
  1. 60S ribosomal protein L13, putative
IPR031309
Domain description: Large ribosomal subunit protein uL5, C-terminal
Occurring in:
  1. 60S ribosomal protein L11a, putative
IPR031310
Domain description: Large ribosomal subunit protein uL5, N-terminal
Occurring in:
  1. 60S ribosomal protein L11a, putative
IPR025755
Domain description: Large ribosomal subunit protein uL4, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
IPR045240
Domain description: Large ribosomal subunit protein uL4, eukaryotic and archaeal type
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. 60S ribosomal protein L3
IPR045077
Domain description: Large ribosomal subunit protein uL3, archaeal/eukaryotic-type
Occurring in:
  1. 60S ribosomal protein L3
IPR044892
Domain description: Ribosomal protein L3, domain 3, archaeal-type superfamily
Occurring in:
  1. 60S ribosomal protein L3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. 60S ribosomal protein L3
IPR022671
Domain description: Large ribosomal subunit protein uL2, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR014726
Domain description: Large ribosomal subunit protein uL2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
IPR038661
Domain description: Large ribosomal subunit protein eL33 superfamily
Occurring in:
  1. 60S ribosomal protein L35ae, putative
IPR018263
Domain description: Large ribosomal subunit protein eL32, conserved site
Occurring in:
  1. 60S ribosomal protein L32
IPR036351
Domain description: Large ribosomal subunit protein eL32 superfamily
Occurring in:
  1. 60S ribosomal protein L32
IPR020052
Domain description: Large ribosomal subunit protein eL31, conserved site
Occurring in:
  1. 60S ribosomal protein L31
IPR039109
Domain description: Large ribosomal subunit protein eL30-like
Occurring in:
  1. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR035808
Domain description: Large ribosomal subunit protein uL30, eukaryotic/archaeal
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR012988
Domain description: Large ribosomal subunit protein uL30, N-terminal, eukaryotes
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR039699
Domain description: Large ribosomal subunit protein uL30
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR005998
Domain description: Large ribosomal subunit protein uL30, eukaryotic
Occurring in:
  1. 60S ribosomal protein L7, putative
IPR045059
Domain description: Large ribosomal subunit protein uL29, eukaryotes
Occurring in:
  1. 60S ribosomal protein L35, putative
IPR029004
Domain description: Ribosomal eL28/Mak16
Occurring in:
  1. Ribosomal eL28/Mak16 domain-containing protein
IPR041991
Domain description: Large ribosomal subunit protein eL27, KOW domain
Occurring in:
  1. 60S ribosomal protein L27
IPR038655
Domain description: Large ribosomal subunit protein eL27 superfamily
Occurring in:
  1. 60S ribosomal protein L27
IPR038630
Domain description: Ribosomal protein L24e/L24 superfamily
Occurring in:
  1. 60S ribosomal protein L24, putative

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