PDBe 3dc5

X-ray diffraction
1.7Å resolution

Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans

Released:
Source organism: Caenorhabditis elegans
Primary publication:
Purification, crystallization and X-ray structures of the two manganese superoxide dismutases from Caenorhabditis elegans.
OpenAccess logo Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 64 1110-4 (2008)
PMID: 19052361

Function and Biology Details

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Superoxide dismutase [Mn] 2, mitochondrial Chains: A, C
Molecule details ›
Chains: A, C
Length: 195 amino acids
Theoretical weight: 22.36 KDa
Source organism: Caenorhabditis elegans
Expression system: Escherichia coli
UniProt:
  • Canonical: P41977 (Residues: 25-218; Coverage: 89%)
Gene names: C08A9.1, sod-3
Sequence domains:
Structure domains: Fe,Mn superoxide dismutase (SOD) domain

Ligands and Environments

2 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P41212
Unit cell:
a: 81.78Å b: 81.78Å c: 136.031Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.189 0.226
Expression system: Escherichia coli