PDBe 3csv

X-ray diffraction
2.15Å resolution

Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution

Source organism: Ruegeria sp. TM1040
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Aminoglycoside phosphotransferase Chain: A
Molecule details ›
Chain: A
Length: 333 amino acids
Theoretical weight: 38.2 KDa
Source organism: Ruegeria sp. TM1040
Expression system: Escherichia coli
  • Canonical: Q1GCP1 (Residues: 1-332; Coverage: 100%)
Gene name: TM1040_2843
Sequence domains: Phosphotransferase enzyme family
Structure domains:

Ligands and Environments

1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: C2
Unit cell:
a: 113.68Å b: 55.94Å c: 61.22Å
α: 90° β: 102.9° γ: 90°
R R work R free
0.171 0.168 0.228
Expression system: Escherichia coli