› 3clw

X-ray diffraction
2.2Å resolution

Crystal structure of conserved exported protein from Bacteroides fragilis

Released:
DOI: 10.2210/pdb3clw/pdb
PDB entry 3clw coloured by chain, front view.
PDB entry 3clw coloured by chain, side view.
PDB entry 3clw coloured by chain, top view.
Source organism: Bacteroides fragilis NCTC 9343
Entry authors: Bonanno JB, Rutter M, Bain KT, Chang S, Ozyurt K, Smith D, Wasserman S, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177488 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Endo-beta-1,6-galactanase-like domain-containing protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 507 amino acids
Theoretical weight: 58.16 KDa
Source organism: Bacteroides fragilis NCTC 9343
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5LF82 (Residues: 27-522; Coverage: 100%)
Gene name: BF9343_1435
Sequence domains: O-Glycosyl hydrolase family 30
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 31-ID
Spacegroup: P212121
Unit cell:
a: 87.53Å b: 116.258Å c: 393.35Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.201 0.199 0.243
Expression system: Escherichia coli BL21(DE3)

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