PDBe 3vfk

X-ray diffraction
2.8Å resolution

The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
MonodeChloro- Teicoplanin A2-2 Chain: G
Molecule details ›
Chain: G
Length: 7 amino acids
Theoretical weight: 1.17 KDa
Source organism: Actinoplanes teichomyceticus
Ubiquitin Chain: A
Molecule details ›
Chain: A
Length: 79 amino acids
Theoretical weight: 8.95 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P0CG48 (Residues: 609-683; Coverage: 11%)
Gene name: UBC
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: C2
Unit cell:
a: 88.01Å b: 25.18Å c: 38.71Å
α: 90° β: 109.18° γ: 90°
R-values:
R R work R free
0.279 0.278 0.306
Expression system: Escherichia coli