PDBe 3pgk

X-ray diffraction
2.5Å resolution

The structure of yeast phosphoglycerate kinase at 0.25 nm resolution


Function and Biology Details

Reaction catalysed:
ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Phosphoglycerate kinase Chain: A
Molecule details ›
Chain: A
Length: 416 amino acids
Theoretical weight: 44.65 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Not provided
  • Canonical: P00560 (Residues: 2-259, 260-416; Coverage: 100%)
Gene names: PGK1, YCR012W, YCR12W
Sequence domains: Phosphoglycerate kinase
Structure domains: Rossmann fold

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: C2
Unit cell:
a: 126.6Å b: 54.4Å c: 93Å
α: 90° β: 134.4° γ: 90°
Expression system: Not provided