PDBe 3czf

X-ray diffraction
1.2Å resolution

Crystal structure of HLA-B*2709 complexed with the glucagon receptor (GR) peptide (residues 412-420)

Released:
Source organism: Homo sapiens
Entry authors: Loll B, Fiorillo MT, Rueckert C, Saenger W, Sorrentino R, Ziegler A, Uchanska-Ziegler B

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Beta-2-microglobulin Chain: B
Molecule details ›
Chain: B
Length: 100 amino acids
Theoretical weight: 11.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P61769 (Residues: 21-119; Coverage: 100%)
Gene names: B2M, CDABP0092, HDCMA22P
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
Glucagon receptor Chain: C
Molecule details ›
Chain: C
Length: 9 amino acids
Theoretical weight: 1.43 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: P47871 (Residues: 412-420; Coverage: 2%)
Gene name: GCGR
HLA class I histocompatibility antigen, B-27 alpha chain Chain: A
Molecule details ›
Chain: A
Length: 276 amino acids
Theoretical weight: 31.95 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P03989 (Residues: 25-300; Coverage: 82%)
Gene names: HLA-B, HLAB
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-2
Spacegroup: P21
Unit cell:
a: 50.946Å b: 81.933Å c: 65.397Å
α: 90° β: 108.91° γ: 90°
R-values:
R R work R free
0.13 0.129 0.149
Expression systems:
  • Escherichia coli
  • Not provided