PDBe 3at0

X-ray diffraction
2.5Å resolution

Structural and biochemical characterization of ClfB:ligand interactions

Entry author: Ganesh VK

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Clumping factor B Chain: A
Molecule details ›
Chain: A
Length: 338 amino acids
Theoretical weight: 37.49 KDa
Source organism: Staphylococcus aureus subsp. aureus N315
Expression system: Escherichia coli
  • Canonical: Q7A382 (Residues: 212-541; Coverage: 40%)
Gene names: SA2423, clfB
Sequence domains:
Structure domains:
Fibrinogen alpha chain Chain: B
Molecule details ›
Chain: B
Length: 16 amino acids
Theoretical weight: 1.48 KDa
Source organism: Homo sapiens
Expression system: Not provided
  • Canonical: P02671 (Residues: 332-347; Coverage: 2%)
Gene name: FGA

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P43
Unit cell:
a: 86.238Å b: 86.238Å c: 83.864Å
α: 90° β: 90° γ: 90°
R R work R free
0.179 0.178 0.207
Expression systems:
  • Escherichia coli
  • Not provided