Function and Biology

Crystal structure of human PDK4-ADP complex

Source organism: Homo sapiens
Biochemical function: kinase activity
Biological process: negative regulation of anoikis
Cellular component: mitochondrial matrix

EC 2.7.11.2: [Pyruvate dehydrogenase (acetyl-transferring)] kinase

Reaction catalysed:
ATP + [pyruvate dehydrogenase (acetyl-transferring)] = ADP + [pyruvate dehydrogenase (acetyl-transferring)] phosphate
Systematic name:
ATP:[pyruvate dehydrogenase (acetyl-transferring)] phosphotransferase
Alternative Name(s):
  • PDH kinase
  • PDHK
  • PDK
  • PDK1
  • PDK2
  • PDK3
  • PDK4
  • Pyruvate dehydrogenase kinase
  • Pyruvate dehydrogenase kinase (phosphorylating)
  • Pyruvate dehydrogenase kinase activator protein
  • STK1

Sequence families

Pfam Protein families (Pfam)
PF02518
Domain description: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
The deposited structure of PDB entry 2zkj contains 2 copies of Pfam domain PF02518 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase) in [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial. Showing 1 copy in chain B.

PF10436
Domain description: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
The deposited structure of PDB entry 2zkj contains 2 copies of Pfam domain PF10436 (Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase) in [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR003594
Domain description: Histidine kinase/HSP90-like ATPase
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
IPR036890
Domain description: Histidine kinase/HSP90-like ATPase superfamily
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
IPR036784
Domain description: Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain superfamily
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
IPR005467
Domain description: Histidine kinase domain
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
IPR018955
Domain description: Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
IPR039028
Domain description: PDK/BCKDK protein kinase
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial

Structure domains

CATH CATH domains
3.30.565.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Heat Shock Protein 90
Homology: Histidine kinase-like ATPase, C-terminal domain
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
The deposited structure of PDB entry 2zkj contains 2 copies of CATH domain 3.30.565.10 (Heat Shock Protein 90) in [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial. Showing 1 copy in chain B.
1.20.140.20
Class: Mainly Alpha
Architecture: Up-down Bundle
Topology: Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homology: Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain
Occurring in:
  1. [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial
The deposited structure of PDB entry 2zkj contains 2 copies of CATH domain 1.20.140.20 (Butyryl-CoA Dehydrogenase, subunit A; domain 3) in [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial. Showing 1 copy in chain B.