PDBe 2vx8

X-ray diffraction
2.2Å resolution

Vamp7 longin domain Hrb peptide complex

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assemblies composition:
homo dimer
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Arf-GAP domain and FG repeat-containing protein 1; Vesicle-associated membrane protein 7 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 169 amino acids
Theoretical weight: 18.68 KDa
Source organisms: Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P52594 (Residues: 136-175; Coverage: 7%)
  • Canonical: P70280 (Residues: 1-120; Coverage: 55%)
  • nullnull
Gene names: AGFG1, HRB, RAB, RIP, Sybl1, Vamp7
Sequence domains: Regulated-SNARE-like domain
Structure domains: Beta-Lactamase

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-4
Spacegroup: P21212
Unit cell:
a: 105.514Å b: 115.102Å c: 55.44Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.223 0.22 0.28
Expression system: Escherichia coli BL21