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Crystal structure of Glycerol-3-phosphate Dehydrogenase from Escherichia coli

X-ray diffraction
1.75Å resolution
PDB entry 2qcu coloured by chain, front view.
PDB entry 2qcu coloured by chain, side view.
PDB entry 2qcu coloured by chain, top view.
Source organism: Escherichia coli
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Aerobic glycerol-3-phosphate dehydrogenase
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Multimeric state: monomeric
Accessible surface area: 20096.38 Å2
Buried surface area: 8069.79 Å2
Dissociation area: 94.65 Å2
Dissociation energy (ΔGdiss): -2.47 kcal/mol
Dissociation entropy (TΔSdiss): -0.28 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-146441
Assembly 2
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Assembly Name: Aerobic glycerol-3-phosphate dehydrogenase
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Multimeric state: monomeric
Accessible surface area: 19796.74 Å2
Buried surface area: 6710.58 Å2
Dissociation area: 125.82 Å2
Dissociation energy (ΔGdiss): -3.75 kcal/mol
Dissociation entropy (TΔSdiss): -0.3 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-146441

Macromolecules

Aerobic glycerol-3-phosphate dehydrogenase
Chains: A, B
Length: 501 amino acids
Theoretical weight: 56.83 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P13035 (Residues: 1-501; Coverage: 100%)
Gene names: JW3389, b3426, glpD, glyD
Pfam:
InterPro:
CATH:
Aerobic glycerol-3-phosphate dehydrogenase in PDB entry 2qcu, assembly 1, front view.
Aerobic glycerol-3-phosphate dehydrogenase in PDB entry 2qcu, assembly 1, side view.
Aerobic glycerol-3-phosphate dehydrogenase in PDB entry 2qcu, assembly 1, top view.
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