› 2o6q

X-ray diffraction
2.5Å resolution

Structural diversity of the hagfish Variable Lymphocyte Receptors A29

Released:
DOI: 10.2210/pdb2o6q/pdb
PDB entry 2o6q coloured by chain, front view.
PDB entry 2o6q coloured by chain, side view.
PDB entry 2o6q coloured by chain, top view.
Source organism: Eptatretus burgeri
Primary publication:
Structural diversity of the hagfish variable lymphocyte receptors.
Kim HM, Oh SC, Lim KJ, Kasamatsu J, Heo JY, Park BS, Lee H, Yoo OJ, Kasahara M, Lee JO
J Biol Chem 282 6726-32 (2007)
PMID: 17192264

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-174287 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
LRRNT domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 270 amino acids
Theoretical weight: 30.14 KDa
Source organism: Eptatretus burgeri
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q32R26 (Residues: 23-292; Coverage: 77%)
Gene name: VLRA
Sequence domains: Leucine rich repeat
Structure domains: Ribonuclease Inhibitor

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 4A
Spacegroup: P3221
Unit cell:
a: 95.226Å b: 95.226Å c: 77.556Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.227 0.227 0.264
Expression system: Spodoptera frugiperda

Quick links

Citations

24 review citations

Origin and evolution of the adaptive immune system: genetic events and selective pressures.
Flajnik et al. (2010)
23 more

9 mentions without citation

Antigen recognition by variable lymphocyte receptors.
Han et al. (2008)
8 more