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Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode

Source organisms:
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin
The deposited structure of PDB entry 2n3w contains 2 copies of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin. Showing 1 copy in chain B.

PF01851
Domain description: Proteasome/cyclosome repeat
Occurring in:
  1. 26S proteasome regulatory subunit RPN1
The deposited structure of PDB entry 2n3w contains 1 copy of Pfam domain PF01851 (Proteasome/cyclosome repeat) in 26S proteasome regulatory subunit RPN1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR019956
Domain description: Ubiquitin domain
Occurring in:
  1. Ubiquitin
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Ubiquitin
IPR019954
Domain description: Ubiquitin conserved site
Occurring in:
  1. Ubiquitin
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Ubiquitin
IPR002015
Domain description: Proteasome/cyclosome repeat
Occurring in:
  1. 26S proteasome regulatory subunit RPN1
IPR011989
Domain description: Armadillo-like helical
Occurring in:
  1. 26S proteasome regulatory subunit RPN1

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