2fyr

X-ray diffraction
2.2Å resolution

Crystal Structure of Norwalk Virus Protease grown in the presence of AEBSF

Released:

Function and Biology Details

Reactions catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Endopeptidase with a preference for cleavage when the P1 position is occupied by Glu-|- and the P1' position is occupied by Gly-|-
NTP + H(2)O = NDP + phosphate
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182857 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
3C-like protease Chain: A
Molecule details ›
Chain: A
Length: 194 amino acids
Theoretical weight: 20.79 KDa
Source organism: Norwalk virus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q83883 (Residues: 1101-1281; Coverage: 10%)
Gene name: ORF1
Structure domains: Trypsin-like serine proteases

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P6522
Unit cell:
a: 120.49Å b: 120.49Å c: 51.249Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.211 0.211 0.246
Expression system: Escherichia coli BL21(DE3)