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- Human leukocyte Antigen-DM polymorphisms in autoimmune diseases. Alvaro-Benito M, Morrison E, Wieczorek M, Sticht J, Freund C. Open Biol 6 (2016)
Articles - 2fse mentioned but not cited (41)
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- Identification of vaccine and drug targets in Shigella dysenteriae sd197 using reverse vaccinology approach. Jalal K, Abu-Izneid T, Khan K, Abbas M, Hayat A, Bawazeer S, Uddin R. Sci Rep 12 251 (2022)
- Predicting MHC-II binding affinity using multiple instance regression. EL-Manzalawy Y, Dobbs D, Honavar V. IEEE/ACM Trans Comput Biol Bioinform 8 1067-1079 (2011)
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- Overlapping CD8+ and CD4+ T-cell epitopes identification for the progression of epitope-based peptide vaccine from nucleocapsid and glycoprotein of emerging Rift Valley fever virus using immunoinformatics approach. Adhikari UK, Rahman MM. Infect Genet Evol 56 75-91 (2017)
- An effective and effecient peptide binding prediction approach for a broad set of HLA-DR molecules based on ordered weighted averaging of binding pocket profiles. Shen WJ, Zhang S, Wong HS. Proteome Sci 11 S15 (2013)
- A Novel Peptide Binding Prediction Approach for HLA-DR Molecule Based on Sequence and Structural Information. Li Z, Zhao Y, Pan G, Tang J, Guo F. Biomed Res Int 2016 3832176 (2016)
- Computational perspectives revealed prospective vaccine candidates from five structural proteins of novel SARS corona virus 2019 (SARS-CoV-2). Anand R, Biswal S, Bhatt R, Tiwary BN. PeerJ 8 e9855 (2020)
- Impact of Structural Observables From Simulations to Predict the Effect of Single-Point Mutations in MHC Class II Peptide Binders. Ochoa R, Laskowski RA, Thornton JM, Cossio P. Front Mol Biosci 8 636562 (2021)
- Structural Insights Into HLA-DM Mediated MHC II Peptide Exchange. Painter CA, Stern LJ. Curr Top Biochem Res 13 39-55 (2011)
- Subtractive proteomics to identify novel drug targets and reverse vaccinology for the development of chimeric vaccine against Acinetobacter baumannii. Solanki V, Tiwari V. Sci Rep 8 9044 (2018)
- Combination of highly antigenic nucleoproteins to inaugurate a cross-reactive next generation vaccine candidate against Arenaviridae family. Azim KF, Lasker T, Akter R, Hia MM, Bhuiyan OF, Hasan M, Hossain MN. Heliyon 7 e07022 (2021)
- Reverse vaccinology approach for multi-epitope centered vaccine design against delta variant of the SARS-CoV-2. Jalal K, Khan K, Basharat Z, Abbas MN, Uddin R, Ali F, Khan SA, Hassan SSU. Environ Sci Pollut Res Int 29 60035-60053 (2022)
- A conserved subunit vaccine designed against SARS-CoV-2 variants showed evidence in neutralizing the virus. Kibria KMK, Faruque MO, Islam MSB, Ullah H, Mahmud S, Miah M, Saleh AA. Appl Microbiol Biotechnol 106 4091-4114 (2022)
- Computer aided prediction and identification of potential epitopes in the receptor binding domain (RBD) of spike (S) glycoprotein of MERS-CoV. Ali MT, Morshed MM, Gazi MA, Musa MA, Kibria MG, Uddin MJ, Khan MA, Hasan S. Bioinformation 10 533-538 (2014)
- Immunoinformatic approach for the construction of multi-epitopes vaccine against omicron COVID-19 variant. Khan K, Khan SA, Jalal K, Ul-Haq Z, Uddin R. Virology 572 28-43 (2022)
- Novel In Silico mRNA vaccine design exploiting proteins of M. tuberculosis that modulates host immune responses by inducing epigenetic modifications. Al Tbeishat H. Sci Rep 12 4645 (2022)
- A Systematic Immuno-Informatic Approach to Design a Multiepitope-Based Vaccine Against Emerging Multiple Drug Resistant Serratia marcescens. Damas MSF, Mazur FG, Freire CCM, da Cunha AF, Pranchevicius MDS. Front Immunol 13 768569 (2022)
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- Combining docking, molecular dynamics simulations, AD-MET pharmacokinetics properties, and MMGBSA calculations to create specialized protocols for running effective virtual screening campaigns on the autoimmune disorder and SARS-CoV-2 main protease. Edache EI, Uzairu A, Mamza PA, Shallangwa GA, Yagin FH, Abdel Samee N, Mahmoud NF. Front Mol Biosci 10 1254230 (2023)
- Core Proteomics and Immunoinformatic Approaches to Design a Multiepitope Reverse Vaccine Candidate against Chagas Disease. Islam SI, Sanjida S, Ahmed SS, Almehmadi M, Allahyani M, Aljuaid A, Alsaiari AA, Halawi M. Vaccines (Basel) 10 1669 (2022)
- Design of a Multi-epitope Vaccine Against Acinetobacter baumannii Using Immunoinformatics Approach. Touhidinia M, Sefid F, Bidakhavidi M. Int J Pept Res Ther 27 2417-2437 (2021)
- Epitope-Based Immunoinformatic Approach on Heat Shock 70 kDa Protein Complex of Cryptococcus neoformans var. grubii. Elhassan RM, Alsony NM, Othman KM, Izz-Aldin DT, Alhaj TA, Ali AA, Abashir LA, Ahmed OH, Hassan MA. J Immunol Res 2021 9921620 (2021)
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Reviews citing this publication (2)
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- Molecular and structural mapping of collagen fibril interactions. Orgel JP, San Antonio JD, Antipova O. Connect. Tissue Res. 52 2-17 (2011)
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- The rheumatoid arthritis-associated allele HLA-DR10 (DRB1*1001) shares part of its repertoire with HLA-DR1 (DRB1*0101) and HLA-DR4 (DRB*0401). Alvarez I, Collado J, Daura X, Colomé N, Rodríguez-García M, Gallart T, Canals F, Jaraquemada D. Arthritis Rheum. 58 1630-1639 (2008)
- Associations between six classical HLA loci and rheumatoid arthritis: a comprehensive analysis. Mitsunaga S, Suzuki Y, Kuwana M, Sato S, Kaneko Y, Homma Y, Narita A, Kashiwase K, Okudaira Y, Inoue I, Kulski JK, Inoko H. Tissue Antigens 80 16-25 (2012)
- Peptide binding to the HLA-DRB1 supertype: a proteochemometrics analysis. Dimitrov I, Garnev P, Flower DR, Doytchinova I. Eur J Med Chem 45 236-243 (2010)
- Are bacterial vaccine antigens T-cell epitope depleted? Halling-Brown M, Sansom CE, Davies M, Titball RW, Moss DS. Trends Immunol. 29 374-379 (2008)
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- A Comparative Analysis of the Peptide Repertoires of HLA-DR Molecules Differentially Associated With Rheumatoid Arthritis. Scholz E, Mestre-Ferrer A, Daura X, García-Medel N, Carrascal M, James EA, Kwok WW, Canals F, Álvarez I. 68 2412-2421 (2016)
- Characterization of T cell phenotype and function in a double transgenic (collagen-specific TCR/HLA-DR1) humanized model of arthritis. Tang B, Kim S, Hammond S, Cullins DL, Brand DD, Rosloniec EF, Stuart JM, Postlethwaite AE, Kang AH, Myers LK. Arthritis Res. Ther. 16 R7 (2014)
- Effective treatment of polydatin weakens the symptoms of collagen-induced arthritis in mice through its anti-oxidative and anti-inflammatory effects and the activation of MMP-9. Li B, Wang XL. Mol Med Rep 14 5357-5362 (2016)
- CD8+ T Cells Expressing an HLA-DR1 Chimeric Antigen Receptor Target Autoimmune CD4+ T Cells in an Antigen-Specific Manner and Inhibit the Development of Autoimmune Arthritis. Whittington KB, Prislovsky A, Beaty J, Albritton L, Radic M, Rosloniec EF. J Immunol 208 16-26 (2022)
- HLA-DM catalytically enhances peptide dissociation by sensing peptide-MHC class II interactions throughout the peptide-binding cleft. Reyes-Vargas E, Barker AP, Zhou Z, He X, Jensen PE. J Biol Chem 295 2959-2973 (2020)
- The role of posttranslational modifications in generating neo-epitopes that bind to rheumatoid arthritis-associated HLA-DR alleles and promote autoimmune T cell responses. Becart S, Whittington KB, Prislovsky A, Rao NL, Rosloniec EF. PLoS One 16 e0245541 (2021)