› 2d5y

X-ray diffraction
1.98Å resolution

Aspartate Aminotransferase Mutant MC With Isovaleric Acid

Released:
DOI: 10.2210/pdb2d5y/pdb
PDB entry 2d5y coloured by chain, front view.
PDB entry 2d5y coloured by chain, side view.
PDB entry 2d5y coloured by chain, top view.
Source organism: Escherichia coli
Entry authors: Tanaka Y, Nakagawa N, Tada H, Yano T, Masui R, Kuramitsu S

Function and Biology Details

Reaction catalysed: 
L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132575 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aspartate aminotransferase Chain: A
Molecule details ›
Chain: A
Length: 396 amino acids
Theoretical weight: 43.66 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P00509 (Residues: 1-396; Coverage: 100%)
Gene names: JW0911, aspC, b0928
Sequence domains: Aminotransferase class I and II
Structure domains:

Ligands and Environments


Cofactor: Ligand PLP 1 x PLP
1 bound ligand:
Ligand IVA 1 x IVA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU
Spacegroup: C2221
Unit cell:
a: 157.234Å b: 85.152Å c: 78.731Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.184 0.184 0.216
Expression system: Escherichia coli

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