PDBe 2c9n

X-ray diffraction
3.3Å resolution

Structure of the Epstein-Barr virus ZEBRA protein at approximately 3. 5 Angstrom resolution

Released:

Function and Biology Details

Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Entry contents:
1 distinct polypeptide molecule
2 distinct DNA molecules
Macromolecules (3 distinct):
Trans-activator protein BZLF1 Chains: Y, Z
Molecule details ›
Chains: Y, Z
Length: 63 amino acids
Theoretical weight: 7.45 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Escherichia coli
UniProt:
  • Canonical: P03206 (Residues: 175-236; Coverage: 25%)
Gene name: BZLF1
5'-D(*CP*AP*CP*TP*GP*AP*CP*TP*CP*AP *T)-3' Chain: A
Molecule details ›
Chain: A
Length: 11 nucleotides
Theoretical weight: 3.29 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Not provided
5'-D(*CP*AP*TP*GP*AP*GP*TP*CP*AP*GP *T)-3' Chain: B
Molecule details ›
Chain: B
Length: 11 nucleotides
Theoretical weight: 3.37 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Not provided

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-3
Spacegroup: C2
Unit cell:
a: 185.3Å b: 36.37Å c: 26.47Å
α: 90° β: 95.25° γ: 90°
R-values:
R R work R free
0.368 0.368 0.366
Expression systems:
  • Escherichia coli
  • Not provided