PDBe 2c9l

X-ray diffraction
2.25Å resolution

Structure of the Epstein-Barr virus ZEBRA protein

Released:

Function and Biology Details

Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Entry contents:
1 distinct polypeptide molecule
2 distinct DNA molecules
Macromolecules (3 distinct):
Trans-activator protein BZLF1 Chains: Y, Z
Molecule details ›
Chains: Y, Z
Length: 63 amino acids
Theoretical weight: 7.41 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Escherichia coli
UniProt:
  • Canonical: P03206 (Residues: 175-236; Coverage: 25%)
Gene name: BZLF1
5'-D(*AP*AP*GP*CP*AP*CP*TP*GP*AP*CP *TP*CP*AP*TP*GP*AP*AP*GP*T)-3' Chain: A
Molecule details ›
Chain: A
Length: 19 nucleotides
Theoretical weight: 5.84 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Not provided
5'-D(*AP*CP*TP*TP*CP*AP*CP*TP*GP*AP *GP*TP*CP*AP*GP*TP*GP*CP*T)-3' Chain: B
Molecule details ›
Chain: B
Length: 18 nucleotides
Theoretical weight: 5.51 KDa
Source organism: Human gammaherpesvirus 4
Expression system: Not provided

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID13
Spacegroup: C2
Unit cell:
a: 94.17Å b: 26.52Å c: 98.09Å
α: 90° β: 103.95° γ: 90°
R-values:
R R work R free
0.232 0.232 0.264
Expression systems:
  • Escherichia coli
  • Not provided