› 2yzt

X-ray diffraction
1.8Å resolution

Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8

Released:
DOI: 10.2210/pdb2yzt/pdb
PDB entry 2yzt coloured by chain, front view.
PDB entry 2yzt coloured by chain, side view.
PDB entry 2yzt coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Primary publication:
Crystal structure of uncharacterized protein TTHA1756 from Thermus thermophilus HB8: Structural variety in UPF0150 family proteins.
Ebihara A, Manzoku M, Iino H, Kanagawa M, Shinkai A, Yokoyama S, Kuramitsu S
Proteins 71 2097-101 (2008)
PMID: 18338381

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177875 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Type II toxin-antitoxin system HicB family antitoxin Chain: A
Molecule details ›
Chain: A
Length: 67 amino acids
Theoretical weight: 7.79 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SHH4 (Residues: 1-67; Coverage: 100%)
Gene name: TTHA1756
Structure domains: Double Stranded RNA Binding Domain

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 1 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P3121
Unit cell:
a: 50.152Å b: 50.152Å c: 46.817Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.242 0.242 0.271
Expression system: Escherichia coli

Quick links

Citations

2 mentions without citation

Identification and Characterization of the HicAB Toxin-Antitoxin System in the Opportunistic Pathogen Pseudomonas aeruginosa.
Li et al. (2016)
1 more