PDBe 2w0c

X-ray diffraction
7Å resolution

X-ray structure of the entire lipid-containing bacteriophage PM2

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assemblies composition:
hetero 960-mer (preferred)
hetero 16-mer
hetero 80-mer
hetero 96-mer
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Major capsid protein P2 Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 269 amino acids
Theoretical weight: 30.23 KDa
Source organism: Pseudoalteromonas virus PM2
UniProt:
  • Canonical: P15794 (Residues: 1-269; Coverage: 100%)
Gene name: II
Sequence domains: Viral coat protein P2 N-terminal domain
Spike protein P1 Chain: L
Molecule details ›
Chain: L
Length: 335 amino acids
Theoretical weight: 37.54 KDa
Source organism: Pseudoalteromonas virus PM2
UniProt:
  • Canonical: Q9XJR3 (Residues: 1-335; Coverage: 100%)
Gene name: I
Protein P3 Chains: P, Q, R, S
Molecule details ›
Chains: P, Q, R, S
Length: 104 amino acids
Theoretical weight: 10.77 KDa
Source organism: Pseudoalteromonas virus PM2
UniProt:
  • Canonical: Q9XJR6 (Residues: 1-104; Coverage: 100%)
Gene name: III
Protein P6 Chain: T
Molecule details ›
Chain: T
Length: 127 amino acids
Theoretical weight: 14.36 KDa
Source organism: Pseudoalteromonas virus PM2
UniProt:
  • Canonical: Q9XJR1 (Residues: 1-127; Coverage: 100%)
Gene name: VI

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-1, ESRF BEAMLINE ID29
Spacegroup: C2
Unit cell:
a: 946.9Å b: 677.6Å c: 1,067.6Å
α: 90° β: 102.9° γ: 90°
R-values:
R R work R free
0.419 0.419 not available