PDBe 2hjg

X-ray diffraction
2.5Å resolution

The crystal structure of the B. subtilis YphC GTPase in complex with GDP

Source organism: Bacillus subtilis
Primary publication:
The essential GTPase YphC displays a major domain rearrangement associated with nucleotide binding.
Proc. Natl. Acad. Sci. U.S.A. 103 12359-64 (2006)
PMID: 16894162

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
GTPase Der Chain: A
Molecule details ›
Chain: A
Length: 436 amino acids
Theoretical weight: 49.39 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
  • Canonical: P50743 (Residues: 1-436; Coverage: 100%)
Gene names: BSU22840, der, engA, yphC
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:

1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX10.1
Spacegroup: P212121
Unit cell:
a: 62.711Å b: 65.045Å c: 110.61Å
α: 90° β: 90° γ: 90°
R R work R free
0.218 0.215 0.274
Expression system: Escherichia coli