PDBe 1yui

Solution NMR

SOLUTION NMR STRUCTURE OF THE GAGA FACTOR/DNA COMPLEX, REGULARIZED MEAN STRUCTURE

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Entry contents:
1 distinct polypeptide molecule
2 distinct DNA molecules
Macromolecules (3 distinct):
Transcription factor GAGA Chain: A
Molecule details ›
Chain: A
Length: 54 amino acids
Theoretical weight: 6.2 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q08605 (Residues: 319-372; Coverage: 9%)
Gene names: Adf-2, CG33261, GAGA, Nc70F, TFGAGA, Trl
Sequence domains: GAGA factor
Structure domains: Classic Zinc Finger
DNA (5'-D(*GP*CP*CP*GP*AP*GP*AP*GP*TP*AP*C)-3') Chain: B
Molecule details ›
Chain: B
Length: 11 nucleotides
Theoretical weight: 3.38 KDa
Source organism: Synthetic construct
Expression system: Not provided
DNA (5'-D(*GP*TP*AP*CP*TP*CP*TP*CP*GP*GP*C)-3') Chain: C
Molecule details ›
Chain: C
Length: 11 nucleotides
Theoretical weight: 3.33 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Not provided