PDBe 1yn8

X-ray diffraction
1.7Å resolution

SH3 domain of yeast NBP2

Released:
Source organism: Saccharomyces cerevisiae
Entry authors: Kursula P, Kursula I, Song YH, Wilmanns M

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
NAP1-binding protein 2 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 59 amino acids
Theoretical weight: 6.62 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q12163 (Residues: 113-170; Coverage: 25%)
Gene names: NBP2, YDR162C
Sequence domains: SH3 domain
Structure domains: SH3 Domains

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11
Spacegroup: P1
Unit cell:
a: 32.41Å b: 53.3Å c: 57.83Å
α: 111.94° β: 90.98° γ: 104.18°
R-values:
R R work R free
0.167 0.164 0.224
Expression system: Escherichia coli