› 1yji

Solution NMR

RDC-refined Solution NMR structure of reduced putidaredoxin

Released:
DOI: 10.2210/pdb1yji/pdb
PDB entry 1yji coloured by chain, ensemble of 11 models, front view.
PDB entry 1yji coloured by chain, ensemble of 11 models, side view.
PDB entry 1yji coloured by chain, ensemble of 11 models, top view.
Source organism: Pseudomonas putida
Primary publication:
Redox-dependent structural differences in putidaredoxin derived from homologous structure refinement via residual dipolar couplings.
Jain NU, Tjioe E, Savidor A, Boulie J
Biochemistry 44 9067-78 (2005)
PMID: 15966730

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132340 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putidaredoxin Chain: A
Molecule details ›
Chain: A
Length: 106 amino acids
Theoretical weight: 11.43 KDa
Source organism: Pseudomonas putida
Expression system: Escherichia coli
UniProt:
  • Canonical: P00259 (Residues: 2-107; Coverage: 99%)
Gene name: camB
Sequence domains: 2Fe-2S iron-sulfur cluster binding domain
Structure domains: Ubiquitin-like (UB roll)

Ligands and Environments

1 bound ligand:
Ligand FES 1 x FES
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

3 review citations

NMR insights into protein allostery.
Manley et al. (2012)
2 more

1 mention without citation

Properties of Cavities in Biological Structures-A Survey of the Protein Data Bank.
Chwastyk et al. (2020)