1tww Citations

Crystal structure of 7,8-dihydropteroate synthase from Bacillus anthracis: mechanism and novel inhibitor design.

Structure 12 1705-17 (2004)
Related entries: 1tws, 1twz, 1tx0, 1tx2

Cited: 49 times
EuropePMC logo PMID: 15341734

Abstract

Dihydropterate synthase (DHPS) is the target for the sulfonamide class of antibiotics, but increasing resistance has encouraged the development of new therapeutic agents against this enzyme. One approach is to identify molecules that occupy the pterin binding pocket which is distinct from the pABA binding pocket that binds sulfonamides. Toward this goal, we present five crystal structures of DHPS from Bacillus anthracis, a well-documented bioterrorism agent. Three DHPS structures are already known, but our B. anthracis structures provide new insights into the enzyme mechanism. We show how an arginine side chain mimics the pterin ring in binding within the pterin binding pocket. The structures of two substrate analog complexes and the first structure of a DHPS-product complex offer new insights into the catalytic mechanism and the architecture of the pABA binding pocket. Finally, as an initial step in the development of pterin-based inhibitors, we present the structure of DHPS complexed with 5-nitro-6-methylamino-isocytosine.

Articles - 1tww mentioned but not cited (3)

  1. Rationalizing tight ligand binding through cooperative interaction networks. Kuhn B, Fuchs JE, Reutlinger M, Stahl M, Taylor NR. J Chem Inf Model 51 3180-3198 (2011)
  2. Crystal structure of the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase•dihydropteroate synthase bifunctional enzyme from Francisella tularensis. Pemble CW, Mehta PK, Mehra S, Li Z, Nourse A, Lee RE, White SW. PLoS One 5 e14165 (2010)
  3. Synthesis of bi-substrate state mimics of dihydropteroate synthase as potential inhibitors and molecular probes. Qi J, Virga KG, Das S, Zhao Y, Yun MK, White SW, Lee RE. Bioorg Med Chem 19 1298-1305 (2011)


Reviews citing this publication (8)

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Articles citing this publication (38)

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  5. Structural and kinetic evidence for an extended hydrogen-bonding network in catalysis of methyl group transfer. Role of an active site asparagine residue in activation of methyl transfer by methyltransferases. Doukov TI, Hemmi H, Drennan CL, Ragsdale SW. J Biol Chem 282 6609-6618 (2007)
  6. Crystal structure of the bifunctional dihydroneopterin aldolase/6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Streptococcus pneumoniae. Garçon A, Levy C, Derrick JP. J Mol Biol 360 644-653 (2006)
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  11. Pathogenic Nocardia cyriacigeorgica and Nocardia nova Evolve To Resist Trimethoprim-Sulfamethoxazole by both Expected and Unexpected Pathways. Mehta H, Weng J, Prater A, Elworth RAL, Han X, Shamoo Y. Antimicrob Agents Chemother 62 e00364-18 (2018)
  12. Design, Synthesis, and Antimicrobial Evaluation of a New Series of N-Sulfonamide 2-Pyridones as Dual Inhibitors of DHPS and DHFR Enzymes. Azzam RA, Elsayed RE, Elgemeie GH. ACS Omega 5 10401-10414 (2020)
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  14. Structure-based design of novel pyrimido[4,5-c]pyridazine derivatives as dihydropteroate synthase inhibitors with increased affinity. Zhao Y, Hammoudeh D, Yun MK, Qi J, White SW, Lee RE. ChemMedChem 7 861-870 (2012)
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  19. Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis. Shaw GX, Li Y, Shi G, Wu Y, Cherry S, Needle D, Zhang D, Tropea JE, Waugh DS, Yan H, Ji X. FEBS J 281 4123-4137 (2014)
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  24. Exploring the catalytic mechanism of dihydropteroate synthase: elucidating the differences between the substrate and inhibitor. Chotpatiwetchkul W, Boonyarattanakalin K, Gleeson D, Gleeson MP. Org Biomol Chem 15 5593-5601 (2017)
  25. Detection of virulence-related genes in Lactococcus garvieae and their expression in response to different conditions. Eraclio G, Ricci G, Quattrini M, Moroni P, Fortina MG. Folia Microbiol (Praha) 63 291-298 (2018)
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  30. Elucidation of the catalytic mechanism of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase using QM/MM calculations. Jongkon N, Gleeson D, Gleeson MP. Org Biomol Chem 16 6239-6249 (2018)
  31. Insights into the drug resistance induced by the BaDHPS mutations: molecular dynamic simulations and MM/GBSA studies. Chu WT, Zhang JL, Zheng QC, Chen L, Xue Q, Zhang HX. J Biomol Struct Dyn 31 1127-1136 (2013)
  32. Synthesis of pyrazolo-1,2,4-triazolo[4,3-a]quinoxalines as antimicrobial agents with potential inhibition of DHPS enzyme. Z El-Attar MA, Elbayaa RY, Shaaban OG, Habib NS, Abdel Wahab AE, Abdelwahab IA, M El-Hawash SA. Future Med Chem 10 2155-2175 (2018)
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  34. Analysis of random mutations in Salmonella Gallinarum dihydropteroate synthase conferring sulfonamide resistance. Duysak T, Jeong JH, Kim K, Kim JS, Choy HE. Arch Microbiol 205 363 (2023)
  35. Crystal structure of Arabidopsis thaliana HPPK/DHPS, a bifunctional enzyme and target of the herbicide asulam. Vadlamani G, Sukhoverkov KV, Haywood J, Breese KJ, Fisher MF, Stubbs KA, Bond CS, Mylne JS. Plant Commun 3 100322 (2022)
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  38. Synthesis, Structure, Hirshfeld Surface Analysis, Non-Covalent Interaction, and In Silico Studies of 4-Hydroxy-1-[(4-Nitrophenyl)Sulfonyl]Pyrrolidine-2-Carboxyllic Acid. Ugwu DI, Eze FU, Ezeorah CJ, Rhyman L, Ramasami P, Tania G, Eze CC, Uzoewulu CP, Ogboo BC, Okpareke OC. J Chem Crystallogr 1-14 (2023)