1rj5 Citations

Expression, assay, and structure of the extracellular domain of murine carbonic anhydrase XIV: implications for selective inhibition of membrane-associated isozymes.

J Biol Chem 279 7223-8 (2004)
Cited: 63 times
EuropePMC logo PMID: 14660577

Abstract

Carbonic anhydrase (CA) XIV is the most recently identified mammalian carbonic anhydrase isozyme, and its presence has been demonstrated in a number of tissues. Full-length CA XIV is a transmembrane protein composed of an extracellular catalytic domain, a single transmembrane helix, and a short intracellular polypeptide segment. The amino acid sequence identity of human CA XIV relative to the other membrane-associated isozymes (CA IV, CA IX, and CA XII) is 34-46%. We report here the expression and purification of both the full-length enzyme and a truncated, secretory form of murine CA XIV. Both forms of this isozyme are highly active, and both show an abrogation of activity in the presence of 0.2% SDS, in contrast to the behavior of murine CA IV. We also report the crystal structure of the extracellular domain of murine CA XIV at 2.8 A resolution and of an enzyme-acetazolamide complex at 2.9 A resolution. The structure shows a monomeric glycoprotein with a topology similar to that of other mammalian CA isozymes. Based on the x-ray crystallographic results, we compare and contrast known structures of membrane-associated CA isozymes to rationalize the structural elements responsible for the SDS resistance of CA IV and to discuss prospects for the design of selective inhibitors of membrane-associated CA isozymes.

Reviews - 1rj5 mentioned but not cited (1)

  1. Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding. Krishnamurthy VM, Kaufman GK, Urbach AR, Gitlin I, Gudiksen KL, Weibel DB, Whitesides GM. Chem Rev 108 946-1051 (2008)

Articles - 1rj5 mentioned but not cited (4)

  1. Crystal structure of the catalytic domain of the tumor-associated human carbonic anhydrase IX. Alterio V, Hilvo M, Di Fiore A, Supuran CT, Pan P, Parkkila S, Scaloni A, Pastorek J, Pastorekova S, Pedone C, Scozzafava A, Monti SM, De Simone G. Proc Natl Acad Sci U S A 106 16233-16238 (2009)
  2. Insights towards sulfonamide drug specificity in α-carbonic anhydrases. Aggarwal M, Kondeti B, McKenna R. Bioorg Med Chem 21 1526-1533 (2013)
  3. Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog. Premkumar L, Greenblatt HM, Bageshwar UK, Savchenko T, Gokhman I, Sussman JL, Zamir A. Proc Natl Acad Sci U S A 102 7493-7498 (2005)
  4. Homology modeling and QSAR analysis of 1,3,4-thiadiazole and 1,3,4-triazole derivatives as carbonic anhydrase inhibitors. Akula NV, Kumar S, Singh V, Tiwari M. Indian J Biochem Biophys 47 234-242 (2010)


Reviews citing this publication (16)

  1. Structure-based drug discovery of carbonic anhydrase inhibitors. Supuran CT. J Enzyme Inhib Med Chem 27 759-772 (2012)
  2. Carbonic anhydrases as targets for medicinal chemistry. Supuran CT, Scozzafava A. Bioorg Med Chem 15 4336-4350 (2007)
  3. Exploiting the hydrophobic and hydrophilic binding sites for designing carbonic anhydrase inhibitors. De Simone G, Alterio V, Supuran CT. Expert Opin Drug Discov 8 793-810 (2013)
  4. Structure, function and applications of carbonic anhydrase isozymes. Imtaiyaz Hassan M, Shajee B, Waheed A, Ahmad F, Sly WS. Bioorg Med Chem 21 1570-1582 (2013)
  5. Structural annotation of human carbonic anhydrases. Aggarwal M, Boone CD, Kondeti B, McKenna R. J Enzyme Inhib Med Chem 28 267-277 (2013)
  6. The structure and function of carbonic anhydrase isozymes in the respiratory system of vertebrates. Esbaugh AJ, Tufts BL. Respir Physiol Neurobiol 154 185-198 (2006)
  7. Update on carbonic anhydrase inhibitors: a patent review (2008 - 2011). Aggarwal M, McKenna R. Expert Opin Ther Pat 22 903-915 (2012)
  8. Probing the surface of human carbonic anhydrase for clues towards the design of isoform specific inhibitors. Pinard MA, Mahon B, McKenna R. Biomed Res Int 2015 453543 (2015)
  9. Carbonic anhydrase inhibitors: a review on the progress of patent literature (2011-2016). Lomelino C, McKenna R. Expert Opin Ther Pat 26 947-956 (2016)
  10. Insights into the role of reactive sulfhydryl groups of Carbonic Anhydrase III and VII during oxidative damage. Monti DM, De Simone G, Langella E, Supuran CT, Di Fiore A, Monti SM. J Enzyme Inhib Med Chem 32 5-12 (2017)
  11. Thermostable Carbonic Anhydrases in Biotechnological Applications. Di Fiore A, Alterio V, Monti SM, De Simone G, D'Ambrosio K. Int J Mol Sci 16 15456-15480 (2015)
  12. Thermodynamic, kinetic, and structural parameterization of human carbonic anhydrase interactions toward enhanced inhibitor design. Linkuvienė V, Zubrienė A, Manakova E, Petrauskas V, Baranauskienė L, Zakšauskas A, Smirnov A, Gražulis S, Ladbury JE, Matulis D. Q Rev Biophys 51 e10 (2018)
  13. Carbonic Anhydrase Inhibitors and Epilepsy: State of the Art and Future Perspectives. Ciccone L, Cerri C, Nencetti S, Orlandini E. Molecules 26 6380 (2021)
  14. Significance of pH regulation and carbonic anhydrases in tumour progression and implications for diagnostic and therapeutic approaches. Parkkila S. BJU Int 101 Suppl 4 16-21 (2008)
  15. Human carbonic anhydrases and post-translational modifications: a hidden world possibly affecting protein properties and functions. Di Fiore A, Supuran CT, Scaloni A, De Simone G. J Enzyme Inhib Med Chem 35 1450-1461 (2020)
  16. Post-translational modifications in tumor-associated carbonic anhydrases. Di Fiore A, Supuran CT, Scaloni A, De Simone G. Amino Acids 54 543-558 (2022)

Articles citing this publication (42)

  1. Characterization of CA XV, a new GPI-anchored form of carbonic anhydrase. Hilvo M, Tolvanen M, Clark A, Shen B, Shah GN, Waheed A, Halmi P, Hänninen M, Hämäläinen JM, Vihinen M, Sly WS, Parkkila S. Biochem J 392 83-92 (2005)
  2. The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules. Bouyain S, Watkins DJ. Proc Natl Acad Sci U S A 107 2443-2448 (2010)
  3. Carbonic anhydrase inhibitors: inhibition of the transmembrane isozyme XIV with sulfonamides. Nishimori I, Vullo D, Innocenti A, Scozzafava A, Mastrolorenzo A, Supuran CT. Bioorg Med Chem Lett 15 3828-3833 (2005)
  4. Sulfonamides incorporating 1,3,5-triazine moieties selectively and potently inhibit carbonic anhydrase transmembrane isoforms IX, XII and XIV over cytosolic isoforms I and II: Solution and X-ray crystallographic studies. Carta F, Garaj V, Maresca A, Wagner J, Avvaru BS, Robbins AH, Scozzafava A, McKenna R, Supuran CT. Bioorg Med Chem 19 3105-3119 (2011)
  5. X-ray structure of the first `extremo-α-carbonic anhydrase', a dimeric enzyme from the thermophilic bacterium Sulfurihydrogenibium yellowstonense YO3AOP1. Di Fiore A, Capasso C, De Luca V, Monti SM, Carginale V, Supuran CT, Scozzafava A, Pedone C, Rossi M, De Simone G. Acta Crystallogr D Biol Crystallogr 69 1150-1159 (2013)
  6. Crystal structure of human carbonic anhydrase XIII and its complex with the inhibitor acetazolamide. Di Fiore A, Monti SM, Hilvo M, Parkkila S, Romano V, Scaloni A, Pedone C, Scozzafava A, Supuran CT, De Simone G. Proteins 74 164-175 (2009)
  7. Carbonic anhydrase activators: the first X-ray crystallographic study of an adduct of isoform I. Temperini C, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 16 5152-5156 (2006)
  8. Carbonic anhydrase activators: L-Adrenaline plugs the active site entrance of isozyme II, activating better isoforms I, IV, VA, VII, and XIV. Temperini C, Innocenti A, Scozzafava A, Mastrolorenzo A, Supuran CT. Bioorg Med Chem Lett 17 628-635 (2007)
  9. Structural study of interaction between brinzolamide and dorzolamide inhibition of human carbonic anhydrases. Pinard MA, Boone CD, Rife BD, Supuran CT, McKenna R. Bioorg Med Chem 21 7210-7215 (2013)
  10. Carbonic anhydrase XIV is enriched in specific membrane domains of retinal pigment epithelium, Muller cells, and astrocytes. Nagelhus EA, Mathiisen TM, Bateman AC, Haug FM, Ottersen OP, Grubb JH, Waheed A, Sly WS. Proc Natl Acad Sci U S A 102 8030-8035 (2005)
  11. Crystal structure of the most catalytically effective carbonic anhydrase enzyme known, SazCA from the thermophilic bacterium Sulfurihydrogenibium azorense. De Simone G, Monti SM, Alterio V, Buonanno M, De Luca V, Rossi M, Carginale V, Supuran CT, Capasso C, Di Fiore A. Bioorg Med Chem Lett 25 2002-2006 (2015)
  12. Autoimmunity against carbonic anhydrase II affects retinal cell functions in autoimmune retinopathy. Adamus G, Karren L. J Autoimmun 32 133-139 (2009)
  13. Carbonic anhydrase activators: activation of the human isoforms VII (cytosolic) and XIV (transmembrane) with amino acids and amines. Vullo D, Innocenti A, Nishimori I, Scozzafava A, Kaila K, Supuran CT. Bioorg Med Chem Lett 17 4107-4112 (2007)
  14. Carbonic anhydrase activators: the first activation study of the human secretory isoform VI with amino acids and amines. Nishimori I, Onishi S, Vullo D, Innocenti A, Scozzafava A, Supuran CT. Bioorg Med Chem 15 5351-5357 (2007)
  15. Carbonic anhydrase activators: an activation study of the human mitochondrial isoforms VA and VB with amino acids and amines. Vullo D, Nishimori I, Innocenti A, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 17 1336-1340 (2007)
  16. Carbonic anhydrase gene expression in CA II-deficient (Car2-/-) and CA IX-deficient (Car9-/-) mice. Pan P, Leppilampi M, Pastorekova S, Pastorek J, Waheed A, Sly WS, Parkkila S. J Physiol 571 319-327 (2006)
  17. Carbonic anhydrase XIV identified as the membrane CA in mouse retina: strong expression in Müller cells and the RPE. Ochrietor JD, Clamp MF, Moroz TP, Grubb JH, Shah GN, Waheed A, Sly WS, Linser PJ. Exp Eye Res 81 492-500 (2005)
  18. Structural studies of β-carbonic anhydrase from the green alga Coccomyxa: inhibitor complexes with anions and acetazolamide. Huang S, Hainzl T, Grundström C, Forsman C, Samuelsson G, Sauer-Eriksson AE. PLoS One 6 e28458 (2011)
  19. Structural analysis of charge discrimination in the binding of inhibitors to human carbonic anhydrases I and II. Srivastava DK, Jude KM, Banerjee AL, Haldar M, Manokaran S, Kooren J, Mallik S, Christianson DW. J Am Chem Soc 129 5528-5537 (2007)
  20. Carbonic anhydrase activators: Activation of the human cytosolic isozyme III and membrane-associated isoform IV with amino acids and amines. Vullo D, Nishimori I, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 18 4303-4307 (2008)
  21. Accumulation and distribution of doxorubicin in tumour spheroids: the influence of acidity and expression of P-glycoprotein. Mellor HR, Callaghan R. Cancer Chemother Pharmacol 68 1179-1190 (2011)
  22. Carbonic anhydrase inhibitors. Inhibition of transmembrane isozymes XII (cancer-associated) and XIV with anions. Innocenti A, Vullo D, Pastorek J, Scozzafava A, Pastorekova S, Nishimori I, Supuran CT. Bioorg Med Chem Lett 17 1532-1537 (2007)
  23. Carbonic anhydrase inhibitors. Inhibition studies of the human secretory isoform VI with anions. Nishimori I, Innocenti A, Vullo D, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 17 1037-1042 (2007)
  24. Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking. Kalkhof S, Haehn S, Paulsson M, Smyth N, Meiler J, Sinz A. Proteins 78 3409-3427 (2010)
  25. Expression of membrane-associated carbonic anhydrase isoforms IV, IX, XII, and XIV in the rabbit: induction of CA IV and IX during maturation. Purkerson JM, Schwartz GJ. Am J Physiol Regul Integr Comp Physiol 288 R1256-63 (2005)
  26. Carbonic anhydrase inhibitors: inhibition of the cytosolic human isozyme VII with anions. Vullo D, Ruusuvuori E, Kaila K, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 16 3139-3143 (2006)
  27. The structural comparison between membrane-associated human carbonic anhydrases provides insights into drug design of selective inhibitors. Alterio V, Pan P, Parkkila S, Buonanno M, Supuran CT, Monti SM, De Simone G. Biopolymers 101 769-778 (2014)
  28. NMDA receptor-dependent afterdepolarizations are curtailed by carbonic anhydrase 14: regulation of a short-term postsynaptic potentiation. Makani S, Chen HY, Esquenazi S, Shah GN, Waheed A, Sly WS, Chesler M. J Neurosci 32 16754-16762 (2012)
  29. The first example of a significant active site conformational rearrangement in a carbonic anhydrase-inhibitor adduct: the carbonic anhydrase I-topiramate complex. Alterio V, Monti SM, Truppo E, Pedone C, Supuran CT, De Simone G. Org Biomol Chem 8 3528-3533 (2010)
  30. Exploration of the binding mode of indanesulfonamides as selective inhibitors of human carbonic anhydrase type VII by targeting Lys 91. Thiry A, Masereel B, Dogné JM, Supuran CT, Wouters J, Michaux C. ChemMedChem 2 1273-1280 (2007)
  31. Expression of cancer-related carbonic anhydrases IX and XII in normal skin and skin neoplasms. Syrjänen L, Luukkaala T, Leppilampi M, Kallioinen M, Pastorekova S, Pastorek J, Waheed A, Sly WS, Parkkila S, Karttunen T. APMIS 122 880-889 (2014)
  32. Biochemical characterization of the native α-carbonic anhydrase purified from the mantle of the Mediterranean mussel, Mytilus galloprovincialis. Perfetto R, Del Prete S, Vullo D, Sansone G, Barone C, Rossi M, Supuran CT, Capasso C. J Enzyme Inhib Med Chem 32 632-639 (2017)
  33. Carbonic anhydrase inhibitors: inhibition of the human transmembrane isozyme XIV with a library of aromatic/heterocyclic sulfonamides. Ozensoy O, Nishimori I, Vullo D, Puccetti L, Scozzafava A, Supuran CT. Bioorg Med Chem 13 6089-6093 (2005)
  34. pH-controlled histone acetylation amplifies melanocyte differentiation downstream of MITF. Raja DA, Gotherwal V, Burse SA, Subramaniam YJ, Sultan F, Vats A, Gautam H, Sharma B, Sharma S, Singh A, Sivasubbu S, Gokhale RS, Natarajan VT. EMBO Rep 21 e48333 (2020)
  35. Carbonic anhydrase XIV in skeletal muscle: subcellular localization and function from wild-type and knockout mice. Wetzel P, Scheibe RJ, Hellmann B, Hallerdei J, Shah GN, Waheed A, Gros G, Sly WS. Am J Physiol Cell Physiol 293 C358-66 (2007)
  36. Carbonic anhydrase activators. Activation of the membrane-associated isoform XV with amino acids and amines. Innocenti A, Hilvo M, Parkkila S, Scozzafava A, Supuran CT. Bioorg Med Chem Lett 19 3430-3433 (2009)
  37. Basolateral carbonic anhydrase IV in the proximal tubule is a glycosylphosphatidylinositol-anchored protein. Purkerson JM, Kittelberger AM, Schwartz GJ. Kidney Int 71 407-416 (2007)
  38. Carbonic anhydrase inhibitors. Inhibition of red blood cell ostrich (Struthio camelus) carbonic anhydrase with a series of aromatic and heterocyclic sulfonamides. Ozensoy O, Isik S, Arslan O, Arslan M, Scozzafava A, Supuran CT. J Enzyme Inhib Med Chem 20 383-387 (2005)
  39. Enzymes Inhibition and Antioxidant Potential of Medicinal Plants Growing in Oman. Rehman NU, Shah M, Ullah S, Khan M, Khan A, Ullah O, Hussain J, Al-Harrasi A. Biomed Res Int 2022 7880387 (2022)
  40. Loss of luminal carbonic anhydrase XIV results in decreased biliary bicarbonate output, liver fibrosis, and cholangiocyte proliferation in mice. Zhou Z, Qian J, Kini A, Riederer B, Römermann D, Gros G, Seidler U. Pflugers Arch 474 529-539 (2022)
  41. Quaternary ammonium substituted thieno[3,2-e]-1,2-thiazine-6-sulfonamide 1,1-dioxides: Potential membrane-impermeable inhibitors of carbonic anhydrase. May JA, Namil A, Chen HH, Dantanarayana AP, Dupré B, Liao JC. Bioorg Med Chem 14 2052-2059 (2006)
  42. Correlation of photoreceptor damage with anti-retina antibodies level in aqueous humor in macular edema patients. Han X, Zhang L, Tang J, Wang Z, Li S, Yuan L, Qu J. Sci Rep 12 21212 (2022)