PDBe 1qhd

X-ray diffraction
1.95Å resolution

CRYSTAL STRUCTURE OF VP6, THE MAJOR CAPSID PROTEIN OF GROUP A ROTAVIRUS

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Intermediate capsid protein VP6 Chain: A
Molecule details ›
Chain: A
Length: 398 amino acids
Theoretical weight: 44.91 KDa
Source organism: Bovine rotavirus strain RF
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P04509 (Residues: 1-397; Coverage: 100%)
Sequence domains: Rotavirus major capsid protein VP6
Structure domains:

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11, EMBL/DESY, HAMBURG BEAMLINE BW7B
Spacegroup: P4132
Unit cell:
a: 157.78Å b: 157.78Å c: 157.78Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.188 0.22
Expression system: Spodoptera frugiperda