PDBe 1pdl

Electron Microscopy
12Å resolution

Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate

Source organism: Escherichia virus T4
Related structures: EMD-1048

Function and Biology Details

Reaction catalysed:
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Baseplate central spike complex protein gp5 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 575 amino acids
Theoretical weight: 63.18 KDa
Source organism: Escherichia virus T4
  • Canonical: P16009 (Residues: 1-575; Coverage: 100%)
Gene name: 5
Sequence domains:

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 12Å
Relevant EMDB volumes: EMD-1048