PDBe 1ndp

X-ray diffraction
2.2Å resolution

ADENOSINE 5'-DIPHOSPHATE BINDING AND THE ACTIVE SITE OF NUCLEOSIDE DIPHOSPHATE KINASE

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleoside diphosphate kinase, cytosolic Chains: A, B
Molecule details ›
Chains: A, B
Length: 155 amino acids
Theoretical weight: 16.82 KDa
Source organism: Dictyostelium discoideum
Expression system: Not provided
UniProt:
  • Best match: P22887 (Residues: 1-155)
Gene names: DDB_G0273069, DDB_G0273805, gip17, ndkB, ndkC-1, ndkC-2

Ligands and Environments

2 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: R3
Unit cell:
a: 73.18Å b: 73.18Å c: 158.45Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.193 not available not available
Expression system: Not provided