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Bacillus stearothermophilus glycerol dehydrogenase complex with glycerol

X-ray diffraction
2.05Å resolution
PDB entry 1jqa coloured by chain, front view.
PDB entry 1jqa coloured by chain, side view.
PDB entry 1jqa coloured by chain, top view.
Source organism: Geobacillus stearothermophilus
Assemblies composition:
homo octamer
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1
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Assembly Name: Glycerol dehydrogenase
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Multimeric state: homo octamer
Accessible surface area: 100097.83 Å2
Buried surface area: 24432.3 Å2
Dissociation area: 5,329.9 Å2
Dissociation energy (ΔGdiss): 31.69 kcal/mol
Dissociation entropy (TΔSdiss): 46.95 kcal/mol
Symmetry number: 8
PDBe Complex ID: PDB-CPX-152467
Assembly 2 (preferred)
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Assembly Name: Glycerol dehydrogenase
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Multimeric state: homo dimer
Accessible surface area: 27696.83 Å2
Buried surface area: 3440.04 Å2
Dissociation area: 1,214.1 Å2
Dissociation energy (ΔGdiss): 9.44 kcal/mol
Dissociation entropy (TΔSdiss): 13.91 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-152466

Macromolecules

Glycerol dehydrogenase
Chain: A
Length: 370 amino acids
Theoretical weight: 39.56 KDa
Source organism: Geobacillus stearothermophilus
Expression system: Escherichia coli
UniProt:
  • Canonical: P32816 (Residues: 1-370; Coverage: 100%)
Gene names: gld, gldA
Pfam: Iron-containing alcohol dehydrogenase
InterPro:
CATH:
SCOP: Iron-containing alcohol dehydrogenase
Glycerol dehydrogenase in PDB entry 1jqa, assembly 2, front view.
Glycerol dehydrogenase in PDB entry 1jqa, assembly 2, side view.
Glycerol dehydrogenase in PDB entry 1jqa, assembly 2, top view.
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