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CRYSTAL STRUCTURE OF CYTOCHROME C' FROM RHODOCYCLUS GELATINOSUS AT 2.5 ANGSTOMS RESOLUTION

Source organism: Rubrivivax gelatinosus
Biochemical function: metal ion binding
Biological process: electron transport chain
Cellular component: periplasmic space

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GO terms

Sequence family

Pfam Protein family (Pfam)
PF01322
Domain description: Cytochrome C'
Occurring in:
  1. Cytochrome c'
The deposited structure of PDB entry 1jaf contains 2 copies of Pfam domain PF01322 (Cytochrome C') in Cytochrome c'. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR015984
Domain description: Cytochrome c prime, subgroup
Occurring in:
  1. Cytochrome c'
IPR002321
Domain description: Cytochrome c, class II
Occurring in:
  1. Cytochrome c'
IPR010980
Domain description: Cytochrome c/b562
Occurring in:
  1. Cytochrome c'
IPR012127
Domain description: Cytochrome c prime
Occurring in:
  1. Cytochrome c'

Structure domain

CATH CATH domain
1.20.120.10
Class: Mainly Alpha
Architecture: Up-down Bundle
Topology: Four Helix Bundle (Hemerythrin (Met), subunit A)
Homology: Cytochrome c/b562
Occurring in:
  1. Cytochrome c'
The deposited structure of PDB entry 1jaf contains 2 copies of CATH domain 1.20.120.10 (Four Helix Bundle (Hemerythrin (Met), subunit A)) in Cytochrome c'. Showing 1 copy in chain A.
SCOP SCOP annotation
47179
Class: All alpha proteins
Fold: Four-helical up-and-down bundle
Superfamily: Cytochromes
Occurring in:
  1. Cytochrome c'
The deposited structure of PDB entry 1jaf contains 2 copies of SCOP domain 47179 (Cytochrome c'-like) in Cytochrome c'. Showing 1 copy in chain A.

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