› 1dp3

Solution NMR

SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE TRAM PROTEIN

Released:
DOI: 10.2210/pdb1dp3/pdb
PDB entry 1dp3 coloured by chain, ensemble of 20 models, front view.
PDB entry 1dp3 coloured by chain, ensemble of 20 models, side view.
PDB entry 1dp3 coloured by chain, ensemble of 20 models, top view.
Source organism: Escherichia coli
Primary publication:
Solution structure of the DNA-binding domain of TraM.
Stockner T, Plugariu C, Koraimann G, Högenauer G, Bermel W, Prytulla S, Sterk H
Biochemistry 40 3370-7 (2001)
PMID: 11258958

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139490 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Relaxosome protein TraM Chain: A
Molecule details ›
Chain: A
Length: 55 amino acids
Theoretical weight: 6.29 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P07294 (Residues: 2-56; Coverage: 43%)
Gene name: traM
Sequence domains: TraM protein, DNA-binding
Structure domains: TraM protein, DNA-binding

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry; simulated annealing
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Cut and move: protein machinery for DNA processing in bacterial conjugation.
Gomis-Rüth et al. (2006)
5 other articles

1 mention without citation

Structure prediction for the helical skeletons detected from the low resolution protein density map.
Al Nasr et al. (2010)